RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 TympQ99N42 471 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Hnrnpa0Q9CX86 305 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tceal6Q9DB24 200 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm11983V9GXS8 105 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Phf11A6H5X4 337 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kctd18E0CZ26 429 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tulp3O88413 460 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tapt1Q4VBD2 564 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rbms3Q8BWL5 431 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zmynd11Q8R5C8 602 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cmc1Q9CPZ8 106 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q9D3J9 298 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm28363A0A087WQW2 129 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm4450E9Q007 373 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Stxbp1O08599 594 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 AcadsQ07417 412 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 H2-M3Q31093 336 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Kctd19Q562E2 927 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Hsd3b4Q61767 373 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Txndc15Q6P6J9 344 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Btnl9Q8BJE2 536 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Plekha1Q8BUL6 383 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Lrp8Q924X6 996 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 SPINDOCQ05AH6 381 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Abl2Q4JIM5 1182 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Phactr4Q501J7 694 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr798Q7TRH8 311 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Nipa1Q8BHK1 323 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Snx4Q91YJ2 450 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc34a2Q9DBP0 697 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Serpinb9eO08806 377 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Atp6v0d1P51863 351 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Rpl19P84099 196 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 RubcnlQ3TD16 648 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Abhd15Q5F2F2 459 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 G2e3Q5RJY2 716 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Klhl42Q8BFQ9 493 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Evi2bQ8VD58 444 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Olfr1346Q8VGH6 313 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Caskin2Q8VHK1 1201 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 DhddsQ99KU1 333 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ergic2Q9CR89 377 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 HemgnQ9ERZ0 503 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm595A2AF73 655 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm28048F7BCN0 99 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gtpbp1O08582 668 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 H2-Q1O19441 368 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gon7P0C8B4 98 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 IduaP48441 634 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tas2r16P59529 299 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tbx4P70325 552 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mrpl10Q3TBW2 262 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc9b2Q5BKR2 547 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Msantd1Q8BIL2 278 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dis3lQ8C0S1 1053 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ints5Q8CHT3 1018 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Emc3Q99KI3 261 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Sytl2Q99N50 950 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Mfsd10Q9D2V8 456 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Pop5Q9DB28 169 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 PdgfrbP05622 1098 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 AdslP54822 484 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Dhx33Q80VY9 698 aaKnown RBP11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Q8BGA7 448 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gabra4Q9D6F4 552 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 FesP16879 822 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Snap91Q61548 901 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Zzz3Q6KAQ7 910 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cypt2Q6P924 180 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tecpr1Q80VP0 1166 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Fnbp1lQ8K012 605 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 St8sia6Q8K4T1 398 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 Akr1d1Q8VCX1 325 aa11.93□□□□□ -0.5
Trim56-201ENSMUST00000054384 ShprhQ7TPQ3 1674 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm8050L7N2E3 205 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Folh1O35409 752 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ttf1Q62187 859 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gpd2Q64521 727 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Arfrp1Q8BXL7 201 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 FktnQ8R507 461 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Cxxc5Q91WA4 317 aaKnown RBP11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trim3Q9R1R2 744 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ube2ql1A0PJN4 161 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Gm13040A2A8C4 496 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 SagP20443 403 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 GlrbP48168 496 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trim40Q3UWA4 246 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 AbrQ5SSL4 859 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Tbx2Q60707 711 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Atxn2lQ7TQH0 1049 aaKnown RBP11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Slc44a3Q921V7 656 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Ttc25Q9D4B2 624 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Htra2Q9JIY5 458 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Galk1Q9R0N0 392 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Glb1P23780 647 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Hectd3Q3U487 861 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Snx6Q6P8X1 406 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 MtdhQ80WJ7 579 aaKnown RBP11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Vps9d1Q8C190 649 aa11.92□□□□□ -0.5
Trim56-201ENSMUST00000054384 Trmt10aQ8C1Z8 328 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms