RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm10718D3Z1I7 227 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfp169E9Q3R6 731 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Krt8P11679 490 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 CryaaP24622 196 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pdx1P52946 284 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ranbp9P69566 653 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mpp1P70290 466 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Q3TYS2 187 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 CenplQ3U3S3 329 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sh3rf1Q69ZI1 892 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sort1Q6PHU5 825 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam107aQ78TU8 144 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 C8bQ8BH35 589 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 MtbpQ8BJS8 894 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cpsf7Q8BTV2 471 aaKnown RBP8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nmur2Q8BZ39 395 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 CenpuQ8C4M7 410 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc187Q8C5V8 958 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nox1Q8CIZ9 591 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nme5Q99MH5 211 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sec13Q9D1M0 322 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Aff4Q9ESC8 1160 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Chrac1Q9JKP8 129 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 Shcbp1Q9Z179 668 aa8.7□□□□□ -1.02
Trim39-201ENSMUST00000042717 FscbA1EGX6 1074 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ttll9A2APC3 461 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 CatsperbA2RTF1 1109 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Skint8A7XV07 398 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ttc7bE9Q6P5 843 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm20671F6TVX7 576 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr694K7N641 315 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 DldO08749 509 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sult3a1O35403 293 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 CtssO70370 340 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ltb4rO88855 351 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 P01740 135 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Icam1P13597 537 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ptpn22P29352 802 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Akt1P31750 480 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 LmnaP48678 665 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Lim2P56563 173 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tial1P70318 392 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Lypla1P97823 230 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 B230104I21RikQ3USW4 141 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 StradaQ3UUJ4 431 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 GpamQ61586 827 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Klhl5Q6PFE1 708 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cep104Q80V31 926 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Alkbh8Q80Y20 664 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 B130006D01RikQ8BRH6 153 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Trmt10aQ8C1Z8 328 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmc7Q8C428 726 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 TwnkQ8CIW5 685 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr273Q8VG87 317 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Glra3Q91XP5 464 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Grk2Q99MK8 689 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Q9CPS8 106 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rpl4Q9D8E6 419 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Scgb2b21A0A087WQA9 112 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm7792A0A0J9YU01 481 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pcna-ps2A0A140T8V5 261 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfp612A0A1D5RMC2 672 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nlrp1bA1Z198 1177 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm3183D3YUJ6 481 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 PiggD3Z3Y1 983 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r14E9Q759 848 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn1r55E9Q8I6 310 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm3139J3QK78 481 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm3106J3QPH3 481 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 PcnaP17918 261 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hoxd11P23813 323 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 TecP24604 630 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Htr7P32304 448 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hmx2P43687 273 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gucy2eP52785 1108 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ptpn5P54830 541 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rab10P61027 200 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rps3P62908 243 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 ChatQ03059 641 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Eri2Q5BKS4 688 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Chi3l1Q61362 389 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 PigaQ64323 485 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr1355Q7TQU9 310 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr765Q7TRI6 309 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Chil6Q80W26 440 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Kxd1Q80XH1 177 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Clptm1lQ8BXA5 539 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam221bQ8C627 487 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem259Q8CIV2 574 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mrpl38Q8K2M0 380 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 TmieQ8K467 153 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr767Q8VG33 309 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 TmlheQ91ZE0 421 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mlf2Q99KX1 247 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 L3hypdhQ9CXA2 354 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Bcl7aQ9CXE2 210 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gbe1Q9D6Y9 702 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 CasrQ9QY96 1079 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 PikfyveQ9Z1T6 2097 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm7173A0A0G2JEB6 3132 aa8.69□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms