RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Igf2rQ07113 2483 aaKnown RBP16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm5160F8VPN3 147 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Bnc1O35914 961 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Atxn1lP0C7T6 687 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Inf2Q0GNC1 1273 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pdap1Q3UHX2 181 aaKnown RBP16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cyp3a13Q64464 503 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zfp606Q7TSV0 794 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Sgo2Q7TSY8 1164 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Sec22cQ8BXT9 303 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ttc34Q8C0Q3 554 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Amer2Q8CCJ4 672 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc35b2Q91ZN5 431 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 HnrnpabQ99020 285 aaKnown RBP16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zdhhc13Q9CWU2 622 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Atg7Q9D906 698 aa16.21■□□□□ 0.18
Trim28-201ENSMUST00000005705 Mknk1O08605 427 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fpr-rs3O88537 343 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gsta1P13745 223 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ptpn5P54830 541 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Stx1bP61264 288 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Adra1dP97714 562 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cyb5r2Q3KNK3 276 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 CamkvQ3UHL1 512 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Eps15l1Q60902 907 aaKnown RBP16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rbl1Q64701 1063 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gsta1Q6P8Q0 223 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rslcan18Q7M6X5 460 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Clec2eQ80XD9 204 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vps50Q8CI71 964 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr866Q8VFI7 312 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tmem53Q9D0Z3 276 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc7a8Q9QXW9 531 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Celf2Q9Z0H4 508 aaKnown RBP16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vmn2r74E9PW21 853 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Nlrp12E9Q5R7 1054 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr726E9Q8X3 321 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 ClockO08785 855 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc6a20bO88575 635 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Krt4P07744 525 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Mcpt1P11034 246 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Kpna2P52293 529 aaKnown RBP16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tas2r16P59529 299 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Pcsk1P63239 753 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr725Q05A45 321 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 P2rx3Q3UR32 397 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cep295nlQ497N6 533 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Aoc2Q812C9 757 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc6a20aQ8VDB9 592 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Kiaa2013Q91X21 634 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rnf167Q91XF4 347 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cybrd1Q925G2 290 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 TriobpQ99KW3 2014 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tlr6Q9EPW9 795 aa16.2■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc16a6B1AT66 607 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Mup5P11591 180 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ppp3ccP48455 513 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Col28a1Q2UY11 1141 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Wdr36Q3TAQ9 899 aaKnown RBP16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fam83fQ3UKU4 495 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cyp2j13Q3UNV4 503 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Tmem255bQ5FW56 369 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Nfe2l1Q61985 741 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cfap97Q6ZPR1 541 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slfn5Q8CBA2 884 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rprd1aQ8VDS4 312 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Paip2bQ91W45 136 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Zfp655Q9CZP3 541 aaKnown RBP16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fam83dQ9D7I8 585 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Rgs3Q9DC04 966 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 MkksQ9JI70 570 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 CtsrQ9JIA9 334 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Sept5Q9Z2Q6 369 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cfap54Q8C6S9 3106 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Znf518bB2RRE4 1077 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm7073E9QAS1 335 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Serpina3kP07759 418 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 GsnP13020 780 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Traf2P39429 501 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Alox12eP55249 662 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ephx3Q3V1F8 367 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ei24Q61070 340 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Crtc1Q68ED7 630 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Slc39a4Q78IQ7 660 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cpped1Q8BFS6 312 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fbxw7Q8VBV4 629 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Cox18Q8VC74 331 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Hdac11Q91WA3 347 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Mrps2Q924T2 291 aaKnown RBP16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Itfg1Q99KW9 610 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Olfr703Q9EPF5 319 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 NbnQ9R207 751 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Fpr-rs4A4FUQ5 323 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Erich1E9PY43 332 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Gm17175E9Q528 179 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vmn2r55G3UWZ4 781 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Vmn2r53L7N473 806 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 St14P56677 855 aa16.19■□□□□ 0.18
Trim28-201ENSMUST00000005705 Ctps2P70303 586 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms