RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Olfr867Q7TRF3 331 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cdkn2aipQ8BI72 563 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 KyQ8C8H8 661 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Erich5Q8K0S2 362 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Fbxo33Q8VE08 562 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cybrd1Q925G2 290 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cby3Q9CVN6 235 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Clec2gQ9D676 269 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Idh3aQ9D6R2 366 aaKnown RBP12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Jam2Q9JI59 298 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cacna1dQ99246 2179 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Adh6bA0A1D5RMB0 384 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm6133B2RY53 190 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ptpn9O35239 593 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 GhrP16882 650 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ccnd3P30282 292 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Stat5aP42230 793 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mapkapk3Q3UMW7 384 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Elf3Q3UPW2 391 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 IspdQ5RJG7 447 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Smarcd1Q61466 515 aaKnown RBP12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Senp5Q6NXL6 749 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Trim62Q80V85 475 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Dhx33Q80VY9 698 aaKnown RBP12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Nup107Q8BH74 926 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rell1Q8K2J7 272 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ndufaf7Q9CWG8 436 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tor1bQ9ER41 336 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc25a13Q9QXX4 676 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ism1A2ATD1 454 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Olfr596F8VQ26 312 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Csn1s1P19228 313 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Brcc3P46737 291 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 SnnP61807 88 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ca4Q64444 305 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gprc5aQ8BHL4 356 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Prdm8Q8BZ97 687 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Casp9Q8C3Q9 454 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sept8Q8CHH9 429 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ace2Q8R0I0 805 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mark1Q8VHJ5 795 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sh3d19Q91X43 789 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ddx28Q9CWT6 540 aaKnown RBP12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 2610042L04RikQ9D073 150 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cyp3a41aQ9JMA7 504 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Akap8lQ9R0L7 642 aaKnown RBP12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Clcn5Q9WVD4 746 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sdccag3A2AIW0 432 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 HunkO88866 714 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ptger1P35375 405 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Olfr325Q5NCD2 326 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Dnajc1Q61712 552 aaKnown RBP12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Klhl17Q6TDP3 640 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cept1Q8BGS7 416 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Bmt2Q8BXK4 403 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 4931406P16RikQ8C5X1 1059 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 4932414N04RikQ8CEQ9 752 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pphln1Q8K2H1 381 aaKnown RBP12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc35a5Q921R7 437 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Bcas2Q9D287 225 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Arih2Q9Z1K6 492 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 StrcQ8VIM6 1809 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm10720D3Z1I5 223 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cd19P25918 547 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sox2P48432 319 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Irf3P70671 419 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Fmo5P97872 533 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 SPINDOCQ05AH6 381 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pfkfb4Q6DTY7 469 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Frs2Q8C180 508 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pth2rQ91V95 546 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc22a7Q91WU2 540 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sbno2Q7TNB8 1349 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc16a6B1AT66 607 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Vmn2r11E9Q4X4 861 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mknk1O08605 427 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 NfycP70353 335 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Fbp2P70695 339 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Kir3dl1P83555 432 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Etaa1Q5SVT3 877 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cpsf6Q6NVF9 551 aaKnown RBP12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Dnajb13Q80Y75 316 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tmem169Q8BG50 297 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Snx17Q8BVL3 470 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pdia5Q921X9 517 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slco1c1Q9ERB5 715 aa12.73□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc6a21A0A1B0GSD2 748 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Zfp715G3X9T1 886 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm13128L7MU96 475 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Chrna1P04756 457 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc2a3P32037 493 aaKnown RBP12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mc1rQ01727 315 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 1700061G19RikQ08EE8 705 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cyp2d40Q6P8N9 338 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 AtminQ6P9S1 818 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Krr1Q8BGA5 380 aaKnown RBP12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Nmur2Q8BZ39 395 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rnf219Q8K2Y0 722 aa12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Utp6Q8VCY6 597 aaKnown RBP12.72□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pcdhac2Q91Y09 1006 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms