RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FXYD1O00168 92 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PIP5K1BO14986 540 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MTHFD2P13995 350 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 CD1DP15813 335 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 APLP1P51693 650 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 HERVK_113P63132 956 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 SIRPB2Q5JXA9 342 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 SDHAF4Q5VUM1 108 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PHYKPLQ8IUZ5 450 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PTGR2Q8N8N7 351 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 TRMOQ9BU70 441 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 ERVK-6Q9BXR3 956 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 CCM2LQ9NUG4 571 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 CMTM6Q9NX76 183 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 DOCK3Q8IZD9 2030 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 H3BMM5 538 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 UBXN8O00124 270 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 ZSCAN9O15535 394 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 SLC7A4O43246 635 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 LDB2O43679 373 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 CHRNA1P02708 482 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 NAT1P18440 290 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 HOXC8P31273 242 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 RPL9P32969 192 aaKnown RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 GRIK1P39086 918 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MRPS6P82932 125 aaKnown RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 CTBSQ01459 385 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PLOD1Q02809 727 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 SEMA3AQ14563 771 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 OR4D1Q15615 310 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 USP50Q70EL3 339 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-233ENST00000642021 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PGBD5Q8N414 524 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 RIN3Q8TB24 985 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 EFHD1Q9BUP0 239 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MFSD1Q9H3U5 465 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MID1IP1Q9NPA3 183 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MRGBPQ9NV56 204 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 SMOXQ9NWM0 555 aa13.83□□□□□ -0.2
PHGDH-233ENST00000642021 MYADML2A6NDP7 307 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 CLIC3O95833 236 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 OXTRP30559 389 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 CDK9P50750 372 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 STX1BP61266 288 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 PFKFB4Q16877 469 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 MARC1Q5VT66 337 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 LPCAT2Q7L5N7 544 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 RBM12BQ8IXT5 1001 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ALDH16A1Q8IZ83 802 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ROPN1LQ96C74 230 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 TCF12Q99081 682 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 SLX1AQ9BQ83 275 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 MUC3BQ9H195 1237 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 VPS45Q9NRW7 570 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 UXTQ9UBK9 157 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 SLC45A1Q9Y2W3 748 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ATXN1LP0C7T5 689 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 PRSS56P0CW18 603 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 SLC6A2P23975 617 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 SOX11P35716 441 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ETFBP38117 255 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 CPT1AP50416 773 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ATP4BP51164 291 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 RENBPP51606 427 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ECT2LQ008S8 904 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 MAP7D1Q3KQU3 841 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 TBCELQ5QJ74 424 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ARRDC2Q8TBH0 407 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 PPP1R2P1Q96PQ5 205 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 CLK4Q9HAZ1 481 aaKnown RBP13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ABCD2Q9UBJ2 740 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 CPA4Q9UI42 421 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 BTRCQ9Y297 605 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 GIT1Q9Y2X7 761 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 ARL5AQ9Y689 179 aa13.82□□□□□ -0.2
PHGDH-233ENST00000642021 MGEA5O60502 916 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 LINC00032P0C843 101 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 PIRTP0C851 137 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
PHGDH-233ENST00000642021 GEN1Q17RS7 908 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 OVOS1Q6IE37 1185 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
PHGDH-233ENST00000642021 ZNF683Q8IZ20 524 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 TRPC4APQ8TEL6 797 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 TIMMDC1Q9NPL8 285 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 A0A0J9YVX5 310 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 DHRS12A0PJE2 317 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 CYP11A1P05108 521 aa13.81□□□□□ -0.2
PHGDH-233ENST00000642021 FGF4P08620 206 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms