RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 SLC28A3Q9HAS3 691 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 OXSMQ9NWU1 459 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 IL17CQ9P0M4 197 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 CPSF2Q9P2I0 782 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 CEP290O15078 2479 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 TK2O00142 265 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 POP4O95707 220 aaKnown RBP16.42■□□□□ 0.22
PHGDH-216ENST00000641375 ADH1CP00326 375 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 LTA4HP09960 611 aaKnown RBP16.42■□□□□ 0.22
PHGDH-216ENST00000641375 MC4RP32245 332 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 DHCR24Q15392 516 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 PLPP6Q8IY26 295 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 TMEM151AQ8N4L1 468 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 OR6Y1Q8NGX8 325 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 UBXN10Q96LJ8 280 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 ZFYVE1Q9HBF4 777 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 POPDC3Q9HBV1 291 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 FKBPLQ9UIM3 349 aa16.42■□□□□ 0.22
PHGDH-216ENST00000641375 NDUFS3O75489 264 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 CTPS1P17812 591 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 FDXRP22570 491 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 NNMTP40261 264 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 GLRBP48167 497 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 PGGT1BP53609 377 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ASPHQ12797 758 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 LYSMD3Q7Z3D4 306 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 PIWIL2Q8TC59 973 aaKnown RBP16.41■□□□□ 0.22
PHGDH-216ENST00000641375 C20orf27Q9GZN8 174 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 CCDC68Q9H2F9 335 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 KCNK4Q9NYG8 393 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 XPR1Q9UBH6 696 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 FBXO10Q9UK96 956 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 A0A1W2PQ67 120 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 TMEM114B3SHH9 223 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 DNAJC6O75061 913 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ALPIP09923 528 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ADH5P11766 374 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 FSHRP23945 695 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 GKP32189 559 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 CDKN2DP55273 166 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ABCE1P61221 599 aaKnown RBP16.41■□□□□ 0.22
PHGDH-216ENST00000641375 DLG1Q12959 904 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 CSHL1Q14406 222 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 LIPMQ5VYY2 423 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 FBXW10Q5XX13 1052 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
PHGDH-216ENST00000641375 NPAS3Q8IXF0 933 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 NAT16Q8N8M0 369 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 PNPLA1Q8N8W4 532 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 VN1R2Q8NFZ6 395 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 HEXDCQ8WVB3 486 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ZNF641Q96N77 438 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-216ENST00000641375 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 LRRC3BQ96PB8 259 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 LYSMD1Q96S90 227 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 SUV39H2Q9H5I1 410 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 KCNK13Q9HB14 408 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 BPIFA1Q9NP55 256 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 SLC8A2Q9UPR5 921 aa16.41■□□□□ 0.22
PHGDH-216ENST00000641375 C1orf232A0A0U1RR37 186 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 UBA6A0AVT1 1052 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 CAPN8A6NHC0 703 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 TARM1B6A8C7 271 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 CYP17A1P05093 508 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 RBP1P09455 135 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 CCDC166P0CW27 439 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 RECQLP46063 649 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 PEX6Q13608 980 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 ACAP2Q15057 778 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 EML3Q32P44 896 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 GALNTL6Q49A17 601 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 ZNF549Q6P9A3 640 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 BPIFB1Q8TDL5 484 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 LPGAT1Q92604 370 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 ECHDC3Q96DC8 303 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 AARSD1Q9BTE6 412 aaKnown RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 TMEM120AQ9BXJ8 343 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 FAM96AQ9H5X1 160 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 IGSF5Q9NSI5 407 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 GDE1Q9NZC3 331 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 MCM8Q9UJA3 840 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 ERVW-1Q9UQF0 538 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 HOXC11O43248 304 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 BNIP3LO60238 219 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 UBOX5O94941 541 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 WISP3O95389 354 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SBK3P0C264 359 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 HNF1BP35680 557 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 DGKGP49619 791 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 SUOXP51687 545 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 CACNG1Q06432 222 aa16.4■□□□□ 0.22
PHGDH-216ENST00000641375 PTPRRQ15256 657 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms