RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 FAM50BQ9Y247 325 aa8.96□□□□□ -0.97
RTTN-216ENST00000640376 SPO11Q9Y5K1 396 aa8.96□□□□□ -0.97
RTTN-216ENST00000640376 SUPT3HB4E1H0 165 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 SUPT3HO75486 399 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 SRP72O76094 671 aaKnown RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 CRTAMO95727 393 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 FESP07332 822 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 ATF6P18850 670 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 SLC26A3P40879 764 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 GRIA2P42262 883 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 CHN2P52757 468 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 FOXA1P55317 472 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 STX1BP61266 288 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 FAM189BP81408 668 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 RING1Q06587 406 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 IL23RQ5VWK5 629 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 FUT10Q6P4F1 479 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 PRSS55Q6UWB4 352 aaPredicted RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 UGT2A3Q6UWM9 527 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 LARP4Q71RC2 724 aaKnown RBP eCLIP8.96□□□□□ -0.98
RTTN-216ENST00000640376 TMEM173Q86WV6 379 aaPredicted RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 DDIASQ8IXT1 998 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 RMDN1Q96DB5 314 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 CENPKQ9BS16 269 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 CINPQ9BW66 212 aaPredicted RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 FAM192AQ9GZU8 254 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 SPAG4Q9NPE6 437 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 TMEM161AQ9NX61 479 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 AP4B1Q9Y6B7 739 aa8.96□□□□□ -0.98
RTTN-216ENST00000640376 ZFP37Q9Y6Q3 630 aaPredicted RBP8.96□□□□□ -0.98
RTTN-216ENST00000640376 PRORSD1PA6NEY8 169 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 C9JVG2 144 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 NR5A2O00482 541 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PIP5K1BO14986 540 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 AHCYL1O43865 530 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 DNAJA2O60884 412 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 RNASEH2AO75792 299 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 RHOBTB1O94844 696 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CDK14O94921 469 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 NDST3O95803 873 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 OGNP20774 298 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 FGFR3P22607 806 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SLC11A1P49279 550 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SCNN1BP51168 640 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 RPS24P62847 133 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 GNA12Q03113 381 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SLC30A9Q6PML9 568 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CYP2R1Q6VVX0 501 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 GLT6D1Q7Z4J2 308 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 RAB44Q7Z6P3 723 aaPredicted RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 TWIST2Q8WVJ9 160 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CNBD2Q96M20 576 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 AARSD1Q9BTE6 412 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 SLC25A23Q9BV35 468 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 AKTIPQ9H8T0 292 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PAPOLBQ9NRJ5 636 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 MRGBPQ9NV56 204 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PCDHGB4Q9UN71 923 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PCDHGB5Q9Y5G0 923 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 DNAJC15Q9Y5T4 150 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 TRIM24O15164 1050 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 MTHFD2P13995 350 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 FMO4P31512 558 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 GPR17Q13304 367 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 TRIM25Q14258 630 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 GRM2Q14416 872 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 LIN52Q52LA3 116 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PITRM1Q5JRX3 1037 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CATSPER1Q8NEC5 780 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 GPR150Q8NGU9 434 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 TRPC4APQ8TEL6 797 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 ZNF483Q8TF39 744 aaPredicted RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 CDKN2AIPNLQ96HQ2 116 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 NSMCE3Q96MG7 304 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 TRIB3Q96RU7 358 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 MGME1Q9BQP7 344 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SEMA6AQ9H2E6 1030 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 IL1RL2Q9HB29 575 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 UBA2Q9UBT2 640 aaPredicted RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 BTRCQ9Y297 605 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SLC38A8A6NNN8 435 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 NRP2O60462 931 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CSPG5O95196 566 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PGM3O95394 542 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SUOXP51687 545 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 SLC7A2P52569 658 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 IRX1P78414 480 aaPredicted RBP8.95□□□□□ -0.98
RTTN-216ENST00000640376 LAMB3Q13751 1172 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 GK3PQ14409 553 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 TYSND1Q2T9J0 566 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 UGT3A2Q3SY77 523 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 C6orf52Q5T4I8 152 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 PAQR3Q6TCH7 311 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 DENND1CQ8IV53 801 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 CLYBLQ8N0X4 340 aa8.95□□□□□ -0.98
RTTN-216ENST00000640376 BBS5Q8N3I7 341 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms