RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SLC10A5Q5PT55 438 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 RARS2Q5T160 578 aaKnown RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 DENND6AQ8IWF6 608 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 WDR63Q8IWG1 891 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 UNC45BQ8IWX7 931 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 SCYL3Q8IZE3 742 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 GUF1Q8N442 669 aaKnown RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 PNLDC1Q8NA58 520 aaKnown RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 BEST2Q8NFU1 509 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 HDAC11Q96DB2 347 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 RRNAD1Q96FB5 475 aaKnown RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 RITA1Q96K30 269 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 FER1L6-AS2Q96M78 137 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 ZNF570Q96NI8 536 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 TIMP4Q99727 224 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 FAM110AQ9BQ89 295 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 MMP27Q9H306 513 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 MOV10Q9HCE1 1003 aaKnown RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 RNF146Q9NTX7 359 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 PLEKHB1Q9UF11 243 aaPredicted RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 WNT6Q9Y6F9 365 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 A3GALT2U3KPV4 340 aa6.5□□□□□ -1.37
RFC1-217ENST00000639695 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
RFC1-217ENST00000639695 FOXO6A8MYZ6 492 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 H3BQ06 376 aaPredicted RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 SLC7A4O43246 635 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 DIAPH2O60879 1101 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 MMP2P08253 660 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 CYP2A6P11509 494 aaPredicted RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 ATP5F1P24539 256 aaPredicted RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 KRT2P35908 639 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 SUOXP51687 545 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 ARSEP51690 589 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 YPEL5P62699 121 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 TMF1P82094 1093 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 MRPS34P82930 218 aaKnown RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 IL11RAQ14626 422 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 CDONQ4KMG0 1287 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 PRAMEF19Q5SWL8 479 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 LRIF1Q5T3J3 769 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 SUMO4Q6EEV6 95 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 ERN2Q76MJ5 926 aaKnown RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 LINGO2Q7L985 606 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 ADCK2Q7Z695 626 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 CHSY1Q86X52 802 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 MMP21Q8N119 569 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 CCAR2Q8N163 923 aaKnown RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 NUP93Q8N1F7 819 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 SLC25A41Q8N5S1 370 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 ZBTB2Q8N680 514 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 ARL10Q8N8L6 244 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 OR8K5Q8NH50 307 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 SLC41A2Q96JW4 573 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 UROC1Q96N76 676 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 COPS7BQ9H9Q2 264 aaPredicted RBP6.49□□□□□ -1.37
RFC1-217ENST00000639695 DBNDD1Q9H9R9 158 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 MLXIPLQ9NP71 852 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 UTS2RQ9UKP6 389 aa6.49□□□□□ -1.37
RFC1-217ENST00000639695 A0A0U1RQF3 1178 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 ARHGEF37A1IGU5 675 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 HSPB6O14558 160 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 UGDHO60701 494 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 RECQL5O94762 991 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 ENO3P13929 434 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 GJA1P17302 382 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 WT1P19544 449 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 GPD1P21695 349 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 RAB28P51157 221 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 DDR1Q08345 913 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 PPP2R5CQ13362 524 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 ESCO2Q56NI9 601 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 EARS2Q5JPH6 523 aaKnown RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 ARMC4Q5T2S8 1044 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 FBXO46Q6PJ61 603 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 QSOX2Q6ZRP7 698 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 TAOK1Q7L7X3 1001 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 NOXA1Q86UR1 476 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 AACSQ86V21 672 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 PARP16Q8N5Y8 322 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 TC2NQ8N9U0 490 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 OSR1Q8TAX0 266 aaPredicted RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 ZNF398Q8TD17 642 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 SNAPC3Q92966 411 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 CEP295NLQ96MC4 621 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 CDRT15Q96T59 188 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 EFHD1Q9BUP0 239 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 SLC25A23Q9BV35 468 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 RTN4RQ9BZR6 473 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 MVB12BQ9H7P6 319 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 ANKRD10Q9NXR5 420 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 DDX25Q9UHL0 483 aaKnown RBP6.48□□□□□ -1.37
RFC1-217ENST00000639695 FBXW11Q9UKB1 542 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 ZNF148Q9UQR1 794 aa6.48□□□□□ -1.37
RFC1-217ENST00000639695 LNP1A1A4G5 178 aa6.47□□□□□ -1.37
RFC1-217ENST00000639695 C1orf226A1L170 272 aa6.47□□□□□ -1.37
RFC1-217ENST00000639695 PRPF4O43172 522 aaKnown RBP eCLIP6.47□□□□□ -1.37
RFC1-217ENST00000639695 KLK8O60259 260 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms