RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 GNPDA1P46926 289 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 POLD2P49005 469 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 HCAR3P49019 387 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 LIMK2P53671 638 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 CDK3Q00526 305 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ILF3Q12906 894 aaKnown RBP eCLIP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 SQSTM1Q13501 440 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 PTPRRQ15256 657 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 TMEM164Q5U3C3 297 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 PSTKQ8IV42 348 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 NAGSQ8N159 534 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ZSCAN1Q8NBB4 408 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 NKD1Q969G9 470 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 SCARF2Q96GP6 870 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 ZNF599Q96NL3 588 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 TAAR9Q96RI9 348 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 HSD3B7Q9H2F3 369 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 SUDS3Q9H7L9 328 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 PHPT1Q9NRX4 125 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 CWC15Q9P013 229 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
CACNA1A-250ENST00000637809 NPIPB15A6NHN6 443 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 LRCH4O75427 683 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 SOD1P00441 154 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 IVLP07476 585 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 FERP16591 822 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 DESP17661 470 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 ADCY8P40145 1251 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 RENBPP51606 427 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 CTBSQ01459 385 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 UBXN1Q04323 297 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 TRAF2Q12933 501 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 PPP6R3Q5H9R7 873 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 SLC30A9Q6PML9 568 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 Q6ZVL8 140 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 SLC25A18Q9H1K4 315 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 TMEM9Q9P0T7 183 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 B3GALT1Q9Y5Z6 326 aa12.11□□□□□ -0.47
CACNA1A-250ENST00000637809 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 A0A0U1RQS6 177 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 A0A1W2PQ67 120 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 TMCO5BA8MYB1 307 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PSMD11O00231 422 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PRPSAP2O60256 369 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 MAFKO60675 156 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PPFIA2O75334 1257 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 CPP00450 1065 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 THRAP10827 490 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 LIFP15018 202 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 MPSTP25325 297 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 UGT1A3P35503 534 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 ZNF135P52742 658 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 DPTQ07507 201 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 RFLNAQ6ZTI6 216 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 TECPR1Q7Z6L1 1165 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 LZTR1Q8N653 840 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 AGBL5Q8NDL9 886 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PDCD6IPQ8WUM4 868 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 SCRN2Q96FV2 425 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 CDH19Q9H159 772 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 KCTD5Q9NXV2 234 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 UNC13CQ8NB66 2214 aa12.1□□□□□ -0.47
CACNA1A-250ENST00000637809 ZW10O43264 779 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 PGLSO95336 258 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 TCF4P15884 667 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 IL1R2P27930 398 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 MYL5Q02045 173 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 ZNF235Q14590 738 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 NCAPHQ15003 741 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 DPYSL2Q16555 572 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 RAET1GQ6H3X3 334 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 PPP1R2P3Q6NXS1 205 aa12.09□□□□□ -0.47
CACNA1A-250ENST00000637809 BORAQ6PGQ7 559 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms