RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TMEM168Q9H0V1 697 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 SUDS3Q9H7L9 328 aaPredicted RBP18.93■□□□□ 0.62
CLN6-221ENST00000637494 PCDH9Q9HC56 1237 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 CHKBQ9Y259 395 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 DMXL2Q8TDJ6 3036 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 FREM2Q5SZK8 3169 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 KNTC1P50748 2209 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 CAPN8A6NHC0 703 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 B4DGG1 531 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 PPP1R12AO14974 1030 aaPredicted RBP18.92■□□□□ 0.62
CLN6-221ENST00000637494 ZW10O43264 779 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 SPOPO43791 374 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 DXOO77932 396 aaKnown RBP18.92■□□□□ 0.62
CLN6-221ENST00000637494 HLA-DQB2P05538 268 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 GLB1P16278 677 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 CDK3Q00526 305 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 CCDC173Q0VFZ6 552 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 AP1B1Q10567 949 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 BIRC2Q13490 618 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 PDK1Q15118 436 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 RFX6Q8HWS3 928 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 CBARPQ8N350 705 aaPredicted RBP18.92■□□□□ 0.62
CLN6-221ENST00000637494 LPCAT1Q8NF37 534 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 GPR156Q8NFN8 814 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 WDR36Q8NI36 951 aaKnown RBP18.92■□□□□ 0.62
CLN6-221ENST00000637494 ADGRE3Q9BY15 652 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 STRADBQ9C0K7 418 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 LUC7LQ9NQ29 371 aaKnown RBP18.92■□□□□ 0.62
CLN6-221ENST00000637494 SATB2Q9UPW6 733 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 ENTPD2Q9Y5L3 495 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 LRP4O75096 1905 aa18.92■□□□□ 0.62
CLN6-221ENST00000637494 PKD1L2Q7Z442 2459 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 JCHAINP01591 159 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 RPLP0P05388 317 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 TNNT1P13805 278 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 NOP2P46087 812 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 GNPDA1P46926 289 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 PPIDQ08752 370 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 SLC10A2Q12908 348 aaPredicted RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 C14orf28Q4W4Y0 310 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 BROXQ5VW32 411 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 FOXR1Q6PIV2 292 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 OGFOD3Q6PK18 319 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 NYAP1Q6ZVC0 841 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 BZW1Q7L1Q6 419 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 ZNF765Q7L2R6 523 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 TECPR1Q7Z6L1 1165 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 RAVER1Q8IY67 606 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 NRSN1Q8IZ57 195 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 PELI3Q8N2H9 469 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 ARL14Q8N4G2 192 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 ARRDC2Q8TBH0 407 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 CCHCR1Q8TD31 782 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 FRMD8Q9BZ67 464 aaPredicted RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 BRD8Q9H0E9 1235 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 TRNAU1APQ9NX07 287 aaKnown RBP18.91■□□□□ 0.62
CLN6-221ENST00000637494 CD84Q9UIB8 345 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 ZZEF1O43149 2961 aa18.91■□□□□ 0.62
CLN6-221ENST00000637494 ANKRD11Q6UB99 2663 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 CFAP47Q6ZTR5 3102 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 CCDC187A0A096LP49 1063 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 KCNK1O00180 336 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 NTN3O00634 580 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 CEACAM5P06731 702 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 PNLIPP16233 465 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 ITPKBP27987 946 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 IFI35P80217 286 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 PTSQ03393 145 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 KCTD16Q68DU8 428 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 SLC9A4Q6AI14 798 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 DOK6Q6PKX4 331 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 SARM1Q6SZW1 724 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 ADAMTSL4Q6UY14 1074 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 NLRP8Q86W28 1048 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 CCNJLQ8IV13 435 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 PLD5Q8N7P1 536 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 Q8N9G6 341 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 GPBAR1Q8TDU6 330 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 LRRN4Q8WUT4 740 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 CCDC97Q96F63 343 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 TMEM74Q96NL1 305 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 MLPHQ9BV36 600 aaPredicted RBP18.9■□□□□ 0.62
CLN6-221ENST00000637494 CDH19Q9H159 772 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 ABCG8Q9H221 673 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 LRRN3Q9H3W5 708 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 SEPT10Q9P0V9 454 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 LRIT1Q9P2V4 623 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 APPL1Q9UKG1 709 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 SUFUQ9UMX1 484 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 PCDHGA8Q9Y5G5 932 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 ZFHX4Q86UP3 3567 aa18.9■□□□□ 0.62
CLN6-221ENST00000637494 ACACAQ13085 2346 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 C1orf232A0A0U1RR37 186 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 IVLP07476 585 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 CD86P42081 329 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 MLLT3P42568 568 aaPredicted RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 MAGEA1P43355 309 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 STC1P52823 247 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 CCL7P80098 99 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms