RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 BLOC1S5Q8TDH9 187 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 E2F7Q96AV8 911 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 SMIM14Q96QK8 99 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 C20orf27Q9GZN8 174 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 MARCOQ9UEW3 520 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 OR51F1A6NGY5 319 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 H0Y626 953 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 MZF1P28698 734 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 GALK1P51570 392 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ACTR3P61158 418 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 FASTKD1Q53R41 847 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 PLPP4Q5VZY2 271 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ZNF470Q6ECI4 717 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 PTAR1Q7Z6K3 402 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 SPATA6LQ8N4H0 392 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 TCF25Q9BQ70 676 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 VPS45Q9NRW7 570 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 DDX18Q9NVP1 670 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 UBA2Q9UBT2 640 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CEP290O15078 2479 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 FCHO1O14526 889 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CCL16O15467 120 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 GLRA3O75311 464 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 BAG2O95816 211 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 LRG1P02750 347 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 C2P06681 752 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 C8AP07357 584 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 BPGMP07738 259 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ESRRAP11474 423 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 MYL4P12829 197 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 SLC1A2P43004 574 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 USP10Q14694 798 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 ZNF789Q5FWF6 425 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 UGT2A3Q6UWM9 527 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 SLC41A1Q8IVJ1 513 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 TNIP2Q8NFZ5 429 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 OR6Y1Q8NGX8 325 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 PPP1R14CQ8TAE6 165 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 PPP1R2P1Q96PQ5 205 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 TREX1Q9NSU2 369 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 HCFC1R1Q9NWW0 138 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ZDHHC7Q9NXF8 308 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 DCDC2Q9UHG0 476 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 A0A1B0GVM2 712 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 TCAF2A6NFQ2 919 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 F8W8V4 182 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 PLIN3O60664 434 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 GSRP00390 522 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 TFAP2AP05549 437 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.56
CLN6-217ENST00000636964 SERPINB8P50452 374 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ARSDP51689 593 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 CDK18Q07002 472 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 FYB2Q5VWT5 728 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 CXorf57Q6NSI4 855 aaKnown RBP11.52□□□□□ -0.56
CLN6-217ENST00000636964 PAOXQ6QHF9 649 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 TPGS1Q6ZTW0 290 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ITIH5Q86UX2 942 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ULK2Q8IYT8 1036 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ST13P4Q8IZP2 240 aaPredicted RBP11.52□□□□□ -0.56
CLN6-217ENST00000636964 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 WFDC5Q8TCV5 224 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ACMSDQ8TDX5 336 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 GAB3Q8WWW8 586 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 LZICQ8WZA0 190 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.56
CLN6-217ENST00000636964 ARNT2Q9HBZ2 717 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ACSS2Q9NR19 701 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.52□□□□□ -0.56
CLN6-217ENST00000636964 ATAD3AQ9NVI7 634 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ANGPTL2Q9UKU9 493 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 ARL5AQ9Y689 179 aa11.52□□□□□ -0.56
CLN6-217ENST00000636964 HEATR9A2RTY3 570 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 B2RBV5 119 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 KDELR3O43731 214 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 MAGEC1O60732 1142 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 SLC4A1P02730 911 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 ARFIP2P53365 341 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 SULT2A1Q06520 285 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 GRAMD4Q6IC98 578 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 NEPROQ6NW34 567 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 HERC6Q8IVU3 1022 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 MFSD6LQ8IWD5 586 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 FATE1Q969F0 183 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 MOCOSQ96EN8 888 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 NDE1Q9NXR1 346 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms