RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CDH2P19022 906 aaPredicted RBP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 IMPDH1P20839 514 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 PBX3P40426 434 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 RENBPP51606 427 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 TBX4P57082 545 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 PPP1R8Q12972 351 aaKnown RBP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 ACAP2Q15057 778 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 ZIK1Q3SY52 487 aaPredicted RBP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 FBXL22Q6P050 247 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 FAM171BQ6P995 826 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 USP50Q70EL3 339 aaPredicted RBP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 RALGPS2Q86X27 583 aaPredicted RBP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 BHMTQ93088 406 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 PBXIP1Q96AQ6 731 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 UBXN10Q96LJ8 280 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 MUC3BQ9H195 1237 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC25A51Q9H1U9 297 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 TUBB1Q9H4B7 451 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 OLAHQ9NV23 265 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 OAZ3Q9UMX2 235 aa14.02□□□□□ -0.17
CACNA1A-228ENST00000636610 CDC7O00311 574 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CACNG3O60359 315 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TRMUO75648 421 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CELF2O95319 508 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 MMP2P08253 660 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 EEF1DP29692 281 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 OR1G1P47890 313 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 LEPRP48357 1165 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 NR1H2P55055 460 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 FRG1Q14331 258 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TSNQ15631 228 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CYP51A1Q16850 503 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SAMD4BQ5PRF9 694 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 C10orf120Q5SQS8 335 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 PAQR3Q6TCH7 311 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CLVS1Q8IUQ0 354 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 RMDN1Q96DB5 314 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 RANBP9Q96S59 729 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TBC1D13Q9NVG8 400 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SMOXQ9NWM0 555 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SUCOQ9UBS9 1254 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 EBF1Q9UH73 591 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 VPS28Q9UK41 221 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TRPV2Q9Y5S1 764 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CEPT1Q9Y6K0 416 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 AP3B1O00203 1094 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CD3EAPO15446 510 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 GLP2RO95838 553 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 PEX11BO96011 259 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CDK4P11802 303 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 OR1E1P30953 314 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SCNN1BP51168 640 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CLCN5P51795 746 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 MS4A13Q5J8X5 152 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 UGT3A1Q6NUS8 523 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CD300LGQ6UXG3 332 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 IMP4Q96G21 291 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 RBM38Q9H0Z9 239 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 ZNF696Q9H7X3 374 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 PTTG2Q9NZH5 202 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 MYRFQ9Y2G1 1151 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 IQCF5A8MTL0 148 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 AP1G1O43747 822 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CLASP2O75122 1294 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 GGT5P36269 586 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 RFTN1Q14699 578 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 POLD3Q15054 466 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 PCBP1Q15365 356 aaKnown RBP eCLIP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 MAPRE2Q15555 327 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TIGD7Q6NT04 549 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC15A3Q8IY34 581 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 THEM5Q8N1Q8 247 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 EFHBQ8N7U6 833 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 HSPBAP1Q96EW2 488 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 ZFRQ96KR1 1074 aaKnown RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 POLR3BQ9NW08 1133 aaPredicted RBP14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CMTM6Q9NX76 183 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 CDC14AQ9UNH5 594 aa14.01□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC12A8A0AV02 714 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 AZIN1O14977 448 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 B4GAT1O43505 415 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 LDB2O43679 373 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 OR1I1O60431 355 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 RHOBTB1O94844 696 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 H6PDO95479 791 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 IGLV3-25P01717 112 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 GPX3P22352 226 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC7A1P30825 629 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 DNAJB13P59910 316 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 TRIM32Q13049 653 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 TAF1CQ15572 869 aaPredicted RBP14□□□□□ -0.17
CACNA1A-228ENST00000636610 UGT3A2Q3SY77 523 aa14□□□□□ -0.17
CACNA1A-228ENST00000636610 TIGD2Q4W5G0 525 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms