RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PIK3R6Q5UE93 754 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 SPATC1Q76KD6 591 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 NXF3Q9H4D5 531 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 ADGRA3Q8IWK6 1321 aa17.84■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC28A1O00337 649 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 LPAL2Q16609 132 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 SAMD4BQ5PRF9 694 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 LIX1Q8N485 282 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 RPS6KA6Q9UK32 745 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 TPRKBQ9Y3C4 175 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 CCDC162PA2VCL2 907 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 KERAO60938 352 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 MYBPC3Q14896 1274 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF549Q6P9A3 640 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 SLC43A3Q8NBI5 491 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 SLAIN1Q8ND83 568 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 PWWP2AQ96N64 755 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 AK5Q9Y6K8 562 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 UBE2QL1A1L167 161 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 KMOO15229 486 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 TFEBP19484 476 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 MPP5Q8N3R9 675 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 FBXO22Q8NEZ5 403 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 GRHL3Q8TE85 626 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 RIPOR3Q96MK2 946 aa17.83■□□□□ 0.45
CACNA1A-227ENST00000636549 MAGEB16A2A368 324 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 PEX14O75381 377 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 GP5P40197 560 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 RPL21P46778 160 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 TRAP1Q12931 704 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 PLEKHG4Q58EX7 1191 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 NLGN4XQ8N0W4 816 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 OR52E6Q96RD3 313 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 PCDHGB3Q9Y5G1 929 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 POU2F1P14859 743 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 ITGA7Q13683 1181 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 AFTPHQ6ULP2 937 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 SAMD3Q8N6K7 520 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 FADS2O95864 444 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 MT-CYBP00156 380 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 MLLT3P42568 568 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 RTL4Q6ZR62 310 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 AP2M1Q96CW1 435 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 MYO19Q96H55 970 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 WDR77Q9BQA1 342 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 TPK1Q9H3S4 243 aa17.83■□□□□ 0.44
CACNA1A-227ENST00000636549 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 C9JVG2 144 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 TFECO14948 347 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 TBX1O43435 398 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 ANXA6P08133 673 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 PPP3CAQ08209 521 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 MAPKAPK3Q16644 382 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 PRSS55Q6UWB4 352 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 RALGPS2Q86X27 583 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 TTC29Q8NA56 475 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 HJURPQ8NCD3 748 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 SLC16A10Q8TF71 515 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 CYB5D2Q8WUJ1 264 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 HDAC10Q969S8 669 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 ZFP37Q9Y6Q3 630 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 EME2A4GXA9 379 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 GNSP15586 552 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 GRIA4P48058 902 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 PUM1Q14671 1186 aaKnown RBP eCLIP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 INO80DQ53TQ3 878 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 UBAP2Q5T6F2 1119 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 FBXO25Q8TCJ0 367 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 HCAR2Q8TDS4 363 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 LOC100509620A0A075B734 347 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 CCDC182A6NF36 153 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 EML1O00423 815 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 AP2S1P53680 142 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 FOXRED2Q8IWF2 684 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 OXNAD1Q96HP4 312 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 DEC1Q9P2X7 70 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 ZNF490Q9ULM2 529 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 TTC24A2A3L6 582 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 PDE9AO76083 593 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 LTA4HP09960 611 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 CSH1P0DML2 217 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 CSH2P0DML3 217 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 ALPPL2P10696 532 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 PECAM1P16284 738 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 CBX3Q13185 183 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 IL18R1Q13478 541 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 DGUOKQ16854 277 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 ADAMTS15Q8TE58 950 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 C11orf16Q9NQ32 467 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 MYOCOSA0A1B0GUC4 107 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 A0A1W2PQJ5 194 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 UBA1P22314 1058 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 SLC6A2P23975 617 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 TXNL4AP83876 142 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 IL18Q14116 193 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 HGSNATQ68CP4 663 aa17.82■□□□□ 0.44
CACNA1A-227ENST00000636549 SLC34A3Q8N130 599 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms