RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 TMC3Q7Z5M5 1100 aa15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 ZNF227Q86WZ6 799 aa15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 DENND6BQ8NEG7 585 aa15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 ZNF483Q8TF39 744 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 SLC28A3Q9HAS3 691 aa15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 HIF3AQ9Y2N7 669 aa15.98■□□□□ 0.15
CACNA1A-221ENST00000636012 C2orf71A6NGG8 1288 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 RGS10O43665 173 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PPIDQ08752 370 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 CFAP206Q8IYR0 622 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 TNS4Q8IZW8 715 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ZCCHC9Q8N567 271 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PTCD2Q8WV60 388 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 DDX4Q9NQI0 724 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SALL1Q9NSC2 1324 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SLC34A1Q06495 639 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MINDY4Q4G0A6 757 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 TRIM40Q6P9F5 258 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PTCHD4Q6ZW05 846 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ZBTB46Q86UZ6 589 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 RASGEF1AQ8N9B8 481 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ETNPPLQ8TBG4 499 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PNPT1Q8TCS8 783 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 THRSPQ92748 146 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ITCHQ96J02 903 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 GAL3ST1Q99999 423 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 XKRYO14609 159 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 RAB10P61026 200 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 GCNT1Q02742 428 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 GFOD2Q3B7J2 385 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 CXXC5Q7LFL8 322 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 JAZF1Q86VZ6 243 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 OR4L1Q8NH43 312 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 VANGL1Q8TAA9 524 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ACO2Q99798 780 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 IL25Q9H293 177 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ZNF510Q9Y2H8 683 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 VIPP01282 170 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MAPK8P45983 427 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PDX1P52945 283 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 TIMM50Q3ZCQ8 353 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 TAPT1Q6NXT6 567 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 HNRNPLLQ8WVV9 542 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SLC47A1Q96FL8 570 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ZFRQ96KR1 1074 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MTMR9Q96QG7 549 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 AP3M1Q9Y2T2 418 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SCAMP1O15126 338 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 BANF1O75531 89 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SERPINB7O75635 380 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PRH1P02810 166 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 CXCR3P49682 368 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 HSF2Q03933 536 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 BNIP2Q12982 314 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MED22Q15528 200 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PPCDCQ96CD2 204 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 CITED4Q96RK1 184 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SPATA9Q9BWV2 254 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 KCNE2Q9Y6J6 123 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 PIAS1O75925 651 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 FAM153BP0C7A2 387 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 ELNP15502 786 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 SMIM11AP58511 58 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MAMLD1Q13495 774 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 FAM153CQ494X1 144 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 TRAPPC9Q96Q05 1148 aa15.97■□□□□ 0.15
CACNA1A-221ENST00000636012 UBE2QL1A1L167 161 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 ZNF730Q6ZMV8 503 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 PPP3R2Q96LZ3 170 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 C5orf34Q96MH7 638 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 TMEM134Q9H6X4 195 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 CFAP97Q9P2B7 532 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 SAMHD1Q9Y3Z3 626 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 DDX3XO00571 662 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 SAGP10523 405 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 ZNF135P52742 658 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 SULT2A1Q06520 285 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 MAP2K5Q13163 448 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 ERICH5Q6P6B1 374 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 NAXEQ8NCW5 288 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 SSR2P43308 183 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 SNRNP25Q9BV90 132 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 ACP6Q9NPH0 428 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 CHST7Q9NS84 486 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 A0A1W2PQH9 124 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 NPEPPSL1A6NEC2 478 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 FSHRP23945 695 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 IST1P53990 364 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 TNK2Q07912 1038 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 METTL3Q86U44 580 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-221ENST00000636012 DNASE1L2Q92874 299 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms