RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MARCH4Q9P2E8 410 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MTRF1LQ9UGC7 380 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TESQ9UGI8 421 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 STEAP1Q9UHE8 339 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TSPYL4Q9UJ04 414 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TNFSF13BQ9Y275 285 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 DLGAP4Q9Y2H0 992 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RPH3AQ9Y2J0 694 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 C15orf41Q9Y2V0 281 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CLCA3PQ9Y6N3 262 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SALL3Q9BXA9 1300 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FANCIQ9NVI1 1328 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LOC105369274A0A096LPK9 316 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LOC102723532A0A0G2JNH3 316 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 A0A1W2PQ09 198 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 EME2A4GXA9 379 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 HMX3A6NHT5 357 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NCF1BA6NI72 391 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NCF1CA8MVU1 366 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 KPNA7A9QM74 516 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 STMND1H3BQB6 276 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FCHO1O14526 889 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 YKT6O15498 198 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CTIFO43310 598 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 VEGFDO43915 354 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PEX1O43933 1283 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GPRIN2O60269 458 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 TSPAN1O60635 241 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ERLIN1O75477 346 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FLOT1O75955 427 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ACTL6BO94805 426 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NXPH3O95157 252 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 F9P00740 461 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 IGLV2-14P01704 120 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CHRNA1P02708 482 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ALPPP05187 535 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PRKCBP05771 671 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FESP07332 822 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GALTP07902 379 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CHRM2P08172 466 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CNPP09543 421 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 UBTFL6P0CB48 400 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ALPPL2P10696 532 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GHRP10912 638 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CD19P15391 556 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ZFXP17010 805 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PRKACBP22694 351 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GLRA2P23416 452 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PTAFRP25105 342 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 KLRK1P26718 216 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CCR1P32246 355 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 RFC2P35250 354 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 TAGLN2P37802 199 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PBX1P40424 430 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 HAAOP46952 286 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 AARSP49588 968 aaKnown RBP eCLIP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CCT8P50990 548 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 BLVRAP53004 296 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 POLGP54098 1239 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CACNA2D1P54289 1103 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CASP9P55211 416 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 EIF4A1P60842 406 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ASIC1P78348 528 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 MRPS15P82914 257 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 RNASELQ05823 741 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ELP6Q0PNE2 266 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GALNT2Q10471 571 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LMAN2Q12907 356 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 NPRL3Q12980 569 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 GPM6BQ13491 265 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 TRA2AQ13595 282 aaKnown RBP eCLIP3.01□□□□□ -1.931e-6■■■□□ 17.1
PSPC1-208ENST00000635562 BYSLQ13895 437 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CAPSQ13938 189 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ZNF169Q14929 603 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PDK1Q15118 436 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PRICKLE4Q2TBC4 344 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 HFEQ30201 348 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 MYLK3Q32MK0 819 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 LRIT3Q3SXY7 679 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ZRANB3Q5FWF4 1079 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 C1orf185Q5T7R7 199 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 KRT80Q6KB66 452 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 INO80CQ6PI98 192 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SUSD1Q6UWL2 747 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ISLR2Q6UXK2 745 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ATF7IPQ6VMQ6 1270 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 FAM83HQ6ZRV2 1179 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 Q6ZWC4 215 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CHST3Q7LGC8 479 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PLPPR4Q7Z2D5 763 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ZNF551Q7Z340 670 aaPredicted RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 TAF8Q7Z7C8 310 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 COMTD1Q86VU5 262 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 ERO1BQ86YB8 467 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 PSTKQ8IV42 348 aaKnown RBP3.01□□□□□ -1.93
PSPC1-208ENST00000635562 DENND6AQ8IWF6 608 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 CD302Q8IX05 232 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 EFCAB13Q8IY85 973 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 SCYL3Q8IZE3 742 aa3.01□□□□□ -1.93
PSPC1-208ENST00000635562 OR4N4Q8N0Y3 316 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms