RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 NECAB3Q96P71 396 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 FOXQ1Q9C009 403 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 LRMDAQ9H2I8 198 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TBC1D17Q9HA65 648 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 TBC1D30Q9Y2I9 924 aa12.48□□□□□ -0.41
SYNGAP1-207ENST00000628646 HEATR9A2RTY3 570 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 UGT1A9O60656 530 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 DNAJC6O75061 913 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 RFPL1O75677 317 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 FGF1P05230 155 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 MLNP12872 115 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 CSE1LP55060 971 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRKD1Q15139 912 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GIMAP7Q8NHV1 300 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 RFWD2Q8NHY2 731 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 UGT1A7Q9HAW7 530 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 UGT1A10Q9HAW8 530 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 UGT1A8Q9HAW9 530 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 LRRC72A6NJI9 287 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GCATO75600 419 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 LEFTY1O75610 366 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GSRP00390 522 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 NPY2RP49146 381 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 PTRHD1Q6GMV3 140 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 RAET1GQ6H3X3 334 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 STMN2Q93045 179 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 VAPBO95292 243 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 CCNFP41002 786 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GRIA1P42261 906 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 ATXN3P54252 364 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 ELP6Q0PNE2 266 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 INO80DQ53TQ3 878 aaPredicted RBP12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 DGKKQ5KSL6 1271 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 Q6ZNB5 142 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 PRR23BQ6ZRT6 265 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 DEFB119Q8N690 84 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 AGAP11Q8TF27 550 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 DNASE1L2Q92874 299 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 FAM136AQ96C01 138 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 PSKH2Q96QS6 385 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 FAM83CQ9BQN1 747 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 HACD3Q9P035 362 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 MCM8Q9UJA3 840 aa12.47□□□□□ -0.41
SYNGAP1-207ENST00000628646 GOLGA8QA0A0J9YX86 632 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 GOLGA8OA6NCC3 632 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 GOLGA8NF8WBI6 632 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 HOXC11O43248 304 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ERP27Q96DN0 273 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 HPS4Q9NQG7 708 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 EPS15L1Q9UBC2 864 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZNF180Q9UJW8 692 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 STK38LQ9Y2H1 464 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 MTO1Q9Y2Z2 717 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 EGFP01133 1207 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 GM2AP17900 193 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZXDBP98169 803 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 CERCAMQ5T4B2 595 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 APOPT1Q96IL0 206 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 TSGA13Q96PP4 275 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 HHIPQ96QV1 700 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZFYVE1Q9HBF4 777 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 ZFP69BQ9UJL9 534 aa12.46□□□□□ -0.41
SYNGAP1-207ENST00000628646 A0A1W2PP55 124 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 I6L893 689 aaPredicted RBP12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 GPR1P46091 355 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARMCX6Q7L4S7 300 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 CHST14Q8NCH0 376 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 CALML6Q8TD86 181 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 PRR11Q96HE9 360 aaPredicted RBP12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 LRRC3BQ96PB8 259 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 CYP8B1Q9UNU6 501 aa12.46□□□□□ -0.42
SYNGAP1-207ENST00000628646 A0A0G2JND7 137 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 CCDC22O60826 627 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 SPANXN3Q5MJ09 141 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRMT10BQ6PF06 316 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 UNC5AQ6ZN44 842 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZNF398Q8TD17 642 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 ADAMTS19Q8TE59 1207 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 SCG3Q8WXD2 468 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 TMEM237Q96Q45 408 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 ACOX2Q99424 681 aa12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 EBNA1BP2Q99848 306 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-207ENST00000628646 GORASP1Q9BQQ3 440 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms