RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 GRID1Q9ULK0 1009 aa9.53□□□□□ -0.88
PDLIM5-223ENST00000627587 RAI2Q9Y5P3 530 aa9.53□□□□□ -0.88
PDLIM5-223ENST00000627587 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-223ENST00000627587 TPRP12270 2363 aaKnown RBP9.52□□□□□ -0.88
PDLIM5-223ENST00000627587 ACACBO00763 2458 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 A0A0U1RQS6 177 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CCL22O00626 93 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 GDF9O60383 454 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 SIN3BO75182 1162 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 VAPBO95292 243 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ADH1CP00326 375 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 MT-ND3P03897 115 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CISD3P0C7P0 127 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 GP5P40197 560 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CCNFP41002 786 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ABCG1P45844 678 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 MAPK8P45983 427 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CSRP3P50461 194 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC18A1P54219 525 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 AP1S1P61966 158 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 DMC1Q14565 340 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 LRRC14Q15048 493 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 PLA2G2CQ5R387 149 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 MROH9Q5TGP6 573 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 KIAA0930Q6ICG6 404 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 SRLQ86TD4 932 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 PNPLA1Q8N8W4 532 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 MDGA1Q8NFP4 955 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CENPTQ96BT3 561 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ALKBH8Q96BT7 664 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CHFRQ96EP1 664 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 RBBP8Q99708 897 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 CPNE1Q99829 537 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ADGRE3Q9BY15 652 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 TNKS2Q9H2K2 1166 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 MLXIPLQ9NP71 852 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 HPS4Q9NQG7 708 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 INTS9Q9NV88 658 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 NSMCE4AQ9NXX6 385 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 SLCO3A1Q9UIG8 710 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 ARL5AQ9Y689 179 aa9.52□□□□□ -0.89
PDLIM5-223ENST00000627587 FAM47DPA6NHR8 397 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ANKRD66B4E2M5 251 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 BUD23O43709 281 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 NFATC1O95644 943 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 IGSF6O95976 241 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 TOP3BO95985 862 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ITGA2BP08514 1039 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ADH5P11766 374 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PSMA3P25788 255 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PMLP29590 882 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC8A1P32418 973 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 GMPRP36959 345 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 CSNK1DP48730 415 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 NEK3P51956 506 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SEC24CP53992 1094 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 STPG1Q5TH74 334 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 NAIF1Q69YI7 327 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 FSTL4Q6MZW2 842 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 TIFABQ6ZNK6 161 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ZSWIM9Q86XI8 627 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 CAMK1DQ8IU85 385 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 DENND6AQ8IWF6 608 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 AHI1Q8N157 1196 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 CPA6Q8N4T0 437 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 GABPB2Q8TAK5 448 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 BRSK1Q8TDC3 778 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 BLOC1S5Q8TDH9 187 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PDCD6IPQ8WUM4 868 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ISL2Q96A47 359 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 EID2BQ96D98 161 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 MRGPRX3Q96LB0 322 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 EBF3Q9H4W6 596 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 IARS2Q9NSE4 1012 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 NKIRAS1Q9NYS0 192 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 EVLQ9UI08 416 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PLXNB3Q9ULL4 1909 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 EPG5Q9HCE0 2579 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 OR51F1A6NGY5 319 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 HTRA2O43464 458 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PIGNO95427 931 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ASMTLO95671 621 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 MAGEA12P43365 314 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 GALK1P51570 392 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF140P52738 457 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 LIMK2P53671 638 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SNRPD1P62314 119 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ECT2LQ008S8 904 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 DNAJC3Q13217 504 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 CTBP1Q13363 440 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 THOC5Q13769 683 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 QPCTQ16769 361 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PTPRNQ16849 979 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF789Q5FWF6 425 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms