RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 APOBEC4Q8WW27 367 aaKnown RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 ECHDC3Q96DC8 303 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 SP110Q9HB58 689 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 TRNAU1APQ9NX07 287 aaKnown RBP14.67□□□□□ -0.06
PNKP-218ENST00000625299 ADAM22Q9P0K1 906 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 KIAA1468Q9P260 1216 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 PILRAQ9UKJ1 303 aa14.67□□□□□ -0.06
PNKP-218ENST00000625299 TRBV23OR9-2A0A075B6M9 112 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 ARHGAP42A6NI28 874 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 CHRNB2P17787 502 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 NR1D1P20393 614 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 ERCC5P28715 1186 aaPredicted RBP14.66□□□□□ -0.06
PNKP-218ENST00000625299 CSNK1DP48730 415 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 SCNN1BP51168 640 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 CDK3Q00526 305 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 CNGA3Q16281 694 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 RAET1GQ6H3X3 334 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 TMEM71Q6P5X7 295 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
PNKP-218ENST00000625299 STARD8Q92502 1023 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 RTP4Q96DX8 246 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 RNF31Q96EP0 1072 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 COQ10AQ96MF6 247 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 DPYSL5Q9BPU6 564 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 EFHD1Q9BUP0 239 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 TEX101Q9BY14 249 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 FRMD8Q9BZ67 464 aaPredicted RBP14.66□□□□□ -0.06
PNKP-218ENST00000625299 SLC39A8Q9C0K1 460 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 GPATCH2LQ9NWQ4 482 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 TP53TG5Q9Y2B4 290 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 PLEKHM1Q9Y4G2 1056 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 ST14Q9Y5Y6 855 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 ICE1Q9Y2F5 2266 aa14.66□□□□□ -0.06
PNKP-218ENST00000625299 MYO9AB2RTY4 2548 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 TTC24A2A3L6 582 aaPredicted RBP14.65□□□□□ -0.06
PNKP-218ENST00000625299 ANKRD62A6NC57 917 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 DFFAO00273 331 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 TCN2P20062 427 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 MAP4P27816 1152 aaKnown RBP14.65□□□□□ -0.06
PNKP-218ENST00000625299 ADCY8P40145 1251 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 ETV3P41162 512 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 NDST2P52849 883 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 MLLT10P55197 1068 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 KLRB1Q12918 225 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 PTP4A2Q12974 167 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 PEX6Q13608 980 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 BMPERQ8N8U9 685 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 MIB2Q96AX9 1013 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 MCEEQ96PE7 176 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
PNKP-218ENST00000625299 SLC38A3Q99624 504 aa14.65□□□□□ -0.06
PNKP-218ENST00000625299 SEPT11Q9NVA2 429 aaKnown RBP14.65□□□□□ -0.06
PNKP-218ENST00000625299 TRAFD1O14545 582 aaPredicted RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 STK17BO94768 372 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 KRT7P08729 469 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 UNGP13051 313 aaPredicted RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 MAN1A1P33908 653 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 MAPK9P45984 424 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 NOP2P46087 812 aaKnown RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 GPLD1P80108 840 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 MC1RQ01726 317 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 DNAJC24Q6P3W2 148 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 CEACAM20Q6UY09 585 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 ARHGAP36Q6ZRI8 547 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 MARK2Q7KZI7 788 aaKnown RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 TIPARPQ7Z3E1 657 aaKnown RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 TEX19Q8NA77 164 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 MLKLQ8NB16 471 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 OR10G6Q8NH81 332 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 FNIP1Q8TF40 1166 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 DTD2Q96FN9 168 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 OR2M4Q96R27 311 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 PCDHB18PQ96TA0 734 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 VPS16Q9H269 839 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 APMAPQ9HDC9 416 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 DONSONQ9NYP3 566 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 KLHL3Q9UH77 587 aa14.64□□□□□ -0.07
PNKP-218ENST00000625299 MRPS18BQ9Y676 258 aaKnown RBP14.64□□□□□ -0.07
PNKP-218ENST00000625299 SIGLEC16A6NMB1 481 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 EEF2KO00418 725 aaKnown RBP14.63□□□□□ -0.07
PNKP-218ENST00000625299 DAPK3O43293 454 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 HEXIM1O94992 359 aaKnown RBP14.63□□□□□ -0.07
PNKP-218ENST00000625299 MAP3K6O95382 1288 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 CPP00450 1065 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 CALB1P05937 261 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 IVLP07476 585 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 VIPR1P32241 457 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 KLK7P49862 253 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 ZNF143P52747 638 aaPredicted RBP14.63□□□□□ -0.07
PNKP-218ENST00000625299 COPB1P53618 953 aaKnown RBP14.63□□□□□ -0.07
PNKP-218ENST00000625299 POLR2FP61218 127 aaKnown RBP14.63□□□□□ -0.07
PNKP-218ENST00000625299 AP1S1P61966 158 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 MC2RQ01718 297 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 SQSTM1Q13501 440 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 HSD11B1LQ7Z5J1 315 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 SLC37A2Q8TED4 501 aa14.63□□□□□ -0.07
PNKP-218ENST00000625299 NSMCE3Q96MG7 304 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms