RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 LRFN3Q9BTN0 628 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 C1QTNF7Q9BXJ2 289 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 LRRC40Q9H9A6 602 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 USP29Q9HBJ7 922 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 PCDH9Q9HC56 1237 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 PREBQ9HCU5 417 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 USP36Q9P275 1121 aaKnown RBP8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 PCYOX1Q9UHG3 505 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 RAI2Q9Y5P3 530 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 ACTL7AQ9Y615 435 aa8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 NYNRINQ9P2P1 1898 aaKnown RBP8.3□□□□□ -1.08
AC004009.3-201ENST00000624160 CTAGE15A4D2H0 777 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 AP1G1O43747 822 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 RPP40O75818 363 aaKnown RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 RHOBTB1O94844 696 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 PGLSO95336 258 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CTAGE8P0CG41 777 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 HLA-DPA1P20036 260 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 MAOBP27338 520 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 BASP1P80723 227 aaKnown RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CDK16Q00536 496 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 PDE1BQ01064 536 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 DSC2Q02487 901 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CDK18Q07002 472 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 LAMB3Q13751 1172 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 ARHGEF7Q14155 803 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 SIX1Q15475 284 aaPredicted RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 UGP2Q16851 508 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 SYCP2LQ5T4T6 812 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 KIAA1161Q6NSJ0 714 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CEP68Q76N32 757 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CTAGE6Q86UF2 777 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CACUL1Q86Y37 369 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CAMK1DQ8IU85 385 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CTAGE4Q8IX94 777 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 PGBD5Q8N414 524 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CNTD1Q8N815 330 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CHST14Q8NCH0 376 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 BBOF1Q8ND07 529 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CADM4Q8NFZ8 388 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 OR14C36Q8NHC7 312 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 ARRDC2Q8TBH0 407 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CCDC110Q8TBZ0 833 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 FEM1CQ96JP0 617 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 RBM15Q96T37 977 aaKnown RBP eCLIP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 TDRD1Q9BXT4 1180 aaKnown RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 TPSD1Q9BZJ3 242 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 RAB17Q9H0T7 212 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 MTG2Q9H4K7 406 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 CD248Q9HCU0 757 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 ENAMQ9NRM1 1142 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 HACD3Q9P035 362 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 ASIC3Q9UHC3 531 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 UTP11Q9Y3A2 253 aaKnown RBP8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 MRFAP1Q9Y605 127 aa8.29□□□□□ -1.08
AC004009.3-201ENST00000624160 TECTAO75443 2155 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 F5P12259 2224 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3DA0A087WVF3 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3IA0A087WXS9 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3EA0A087X179 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3KA0A087X1G2 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TSPAN11A1L157 253 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3FA6NER0 549 aaPredicted RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3LB9A6J9 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 H0Y858 1186 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TRAFD1O14545 582 aaPredicted RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 MUSKO15146 869 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 HTRA2O43464 458 aaPredicted RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 PLRG1O43660 514 aaKnown RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 PMPCBO75439 489 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 PCDH8O95206 1070 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 PIGNO95427 931 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 SEMA4FO95754 770 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 NDST3O95803 873 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 KRT14P02533 472 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 FGF1P05230 155 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 CTSLP07711 333 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 TBC1D3HP0C7X1 549 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 SP9P0CG40 484 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 ZNF30P17039 623 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 ADCY8P40145 1251 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 P2RY2P41231 377 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 RGRP47804 291 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 RPS21P63220 83 aaKnown RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 FAM193AP78312 1265 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 RPL6Q02878 288 aaKnown RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 CNTN1Q12860 1018 aa8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 GLE1Q53GS7 698 aaKnown RBP8.28□□□□□ -1.08
AC004009.3-201ENST00000624160 WDR45BQ5MNZ6 344 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms