RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SEPT8Q92599 483 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CEP295NLQ96MC4 621 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 SPON2Q9BUD6 331 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TFB2MQ9H5Q4 396 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MRPL40Q9NQ50 206 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 SPATS2LQ9NUQ6 558 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 POLR3BQ9NW08 1133 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PDP2Q9P2J9 529 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ACTL7AQ9Y615 435 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 KIAA0100Q14667 2235 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CCDC189A1A4V9 331 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TBKBP1A7MCY6 615 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 H3BNC9 293 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRIM38O00635 465 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 INSIG1O15503 277 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CLDN11O75508 207 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ARSAP15289 507 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TSPAN8P19075 237 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MSX2P35548 267 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PSMD8P48556 350 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ATP4BP51164 291 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF140P52738 457 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 RPL26P61254 145 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PSME3P61289 254 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MRPS22P82650 360 aaKnown RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 MED21Q13503 144 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR4D1Q15615 310 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 GRAMD1BQ3KR37 738 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 AGKQ53H12 422 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 REP15Q6BDI9 236 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 LARP4Q71RC2 724 aaKnown RBP eCLIP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 TMEM126BQ8IUX1 230 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 DENND1CQ8IV53 801 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 RNF148Q8N7C7 305 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ICA1LQ8NDH6 482 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 OVCA2Q8WZ82 227 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 EXT2Q93063 718 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 RMDN1Q96DB5 314 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 LRGUKQ96M69 825 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF512Q96ME7 567 aaPredicted RBP8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 SYTL2Q9HCH5 934 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 CACNA2D2Q9NY47 1150 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ADA2Q9NZK5 511 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 DTNAQ9Y4J8 743 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 PCDHGA7Q9Y5G6 932 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 SPO11Q9Y5K1 396 aa8.31□□□□□ -1.08
SND1-IT1-201ENST00000623342 ILVBLA1L0T0 632 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 ACOT8O14734 319 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 ADAM12O43184 909 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 RNASEH1O60930 286 aaKnown RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 GJB5O95377 273 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SNRPB2P08579 225 aaKnown RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 FGF4P08620 206 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 VCLP18206 1134 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 CES1P23141 567 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 RGRP47804 291 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 TUFMP49411 452 aaKnown RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SCNN1BP51168 640 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 RPS24P62847 133 aaKnown RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 NOGQ13253 232 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 LRP8Q14114 963 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 TAF1AQ15573 450 aaPredicted RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 UGT3A2Q3SY77 523 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 HECTD3Q5T447 861 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC8B1Q6J4K2 584 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 KLHDC10Q6PID8 442 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 AFTPHQ6ULP2 937 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 CYHR1Q6ZMK1 362 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 PCDH20Q8N6Y1 951 aaKnown RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 BCL7CQ8WUZ0 217 aaPredicted RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 PLD4Q96BZ4 506 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 C19orf60Q96EN9 201 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 BTBD9Q96Q07 612 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 TUBGCP5Q96RT8 1024 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC25A23Q9BV35 468 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 YIPF3Q9GZM5 350 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 CCDC167Q9P0B6 97 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 SARDHQ9UL12 918 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 CHD5Q8TDI0 1954 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBA6A0AVT1 1052 aaPredicted RBP8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 C2orf81A6NN90 581 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 H3BMM5 538 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBXN8O00124 270 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 FBP2O00757 339 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 COCHO43405 550 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 RHOBTB1O94844 696 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 INHAP05111 366 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 RHOCP08134 193 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZCCHC18P0CG32 403 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 PRSS56P0CW18 603 aa8.3□□□□□ -1.08
SND1-IT1-201ENST00000623342 MTHFD2P13995 350 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms