RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ACTR2P61160 394 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 WDR5P61964 334 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 NCBP1Q09161 790 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 EFR3AQ14156 821 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 MFSD13AQ14CX5 517 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 LARS2Q15031 903 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 TDRD12Q587J7 1177 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 ODF2Q5BJF6 829 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 CCDC122Q5T0U0 273 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SFMBT2Q5VUG0 894 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 C17orf99Q6UX52 265 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 KIAA1324Q6UXG2 1013 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 DCDC5Q6ZRR9 648 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SEPT14Q6ZU15 432 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 NIPA1Q7RTP0 329 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 MIER3Q7Z3K6 550 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 ANKS1BQ7Z6G8 1248 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SYCE1Q8N0S2 351 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TRIM58Q8NG06 486 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 RDM1Q8NG50 284 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 CD99L2Q8TCZ2 262 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 CPT1BQ92523 772 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 KIFAP3Q92845 792 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 ATP6V0A1Q93050 837 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TRIM63Q969Q1 353 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SDCCAG3Q96C92 435 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 CHFRQ96EP1 664 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 DAZAP1Q96EP5 407 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 FAR2Q96K12 515 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TAAR1Q96RJ0 339 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 RUFY1Q96T51 708 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 NAP1L3Q99457 506 aaPredicted RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 PLIN2Q99541 437 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 RIT2Q99578 217 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 JPH2Q9BR39 696 aaPredicted RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 POLR3CQ9BUI4 534 aaPredicted RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATRX-209ENST00000623242 HERC2P3Q9BVR0 1158 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TRIM9Q9C026 710 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 PARVGQ9HBI0 331 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 NRBP2Q9NSY0 501 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 LIN7CQ9NUP9 197 aaKnown RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 MORF4L1Q9UBU8 362 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 ARMCX3Q9UH62 379 aaPredicted RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
ATRX-209ENST00000623242 ODF2LQ9ULJ1 636 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 SLC12A4Q9UP95 1085 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 PPP2R2CQ9Y2T4 447 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TRIM17Q9Y577 477 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 PCDHA10Q9Y5I2 948 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 TRPM7Q96QT4 1865 aa4.28□□□□□ -1.72
ATRX-209ENST00000623242 UBE4BO95155 1302 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GREB1LQ9C091 1923 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 MYH4Q9Y623 1939 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 CTAGE15A4D2H0 777 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 SLC15A5A6NIM6 579 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 LRRC3CA6NJW4 275 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ASB14A6NK59 587 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 DDX39AO00148 427 aaKnown RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 PDXKO00764 312 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MEIS2O14770 477 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ATP8B1O43520 1251 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 JTBO76095 146 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GCNT3O95395 438 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CTAGE8P0CG41 777 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 IGFBP2P18065 325 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MATN1P21941 496 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ANXA13P27216 316 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 NDUFS1P28331 727 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CASP14P31944 242 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GRK5P34947 590 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MATR3P43243 847 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATRX-209ENST00000623242 AARSP49588 968 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATRX-209ENST00000623242 SOX10P56693 466 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 SP4Q02446 784 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 TFF2Q03403 129 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 TLE3Q04726 772 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 RNASELQ05823 741 aaKnown RBP4.27□□□□□ -1.73
ATRX-209ENST00000623242 SLC14A1Q13336 389 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 KRT31Q15323 416 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 STXBP2Q15833 593 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 WHAMMP3Q1A5X7 153 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 EDRF1Q3B7T1 1238 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CEP55Q53EZ4 464 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 HSP90AA4PQ58FG1 418 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ZNF484Q5JVG2 852 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 ZNF569Q5MCW4 686 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MFSD14CQ5VZR4 134 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 MIS18BP1Q6P0N0 1132 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 SYT10Q6XYQ8 523 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 GBP6Q6ZN66 633 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CTAGE6Q86UF2 777 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 CTAGE4Q8IX94 777 aa4.27□□□□□ -1.73
ATRX-209ENST00000623242 LAS2Q8IYD9 372 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms