RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 GKN1Q9NS71 199 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.5
TP53-227ENST00000622645 GIMAP2Q9UG22 337 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 DNMT3LQ9UJW3 386 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 DTNAQ9Y4J8 743 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 DNAJC15Q9Y5T4 150 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 GREB1Q4ZG55 1949 aa11.96□□□□□ -0.5
TP53-227ENST00000622645 H3BNC9 293 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 CDK14O94921 469 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 COL6A1P12109 1028 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 FMO4P31512 558 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 CDKN1CP49918 316 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 KPNA1P52294 538 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 RALGDSQ12967 914 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 STX5Q13190 355 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 LRP8Q14114 963 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 BTG3Q14201 252 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 PTPRRQ15256 657 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 REP15Q6BDI9 236 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 FBXL19Q6PCT2 694 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PAQR3Q6TCH7 311 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 EP400NLQ6ZTU2 488 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ICA1LQ8NDH6 482 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 MDGA1Q8NFP4 955 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 CD99L2Q8TCZ2 262 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 C19orf60Q96EN9 201 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PRICKLE1Q96MT3 831 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 PSKH2Q96QS6 385 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 AARSD1Q9BTE6 412 aaKnown RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 CINPQ9BW66 212 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 MAGEH1Q9H213 219 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 UBA2Q9UBT2 640 aaPredicted RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 FNDC3AQ9Y2H6 1198 aaKnown RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 MED16Q9Y2X0 877 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ASB3Q9Y575 518 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 A0A0U1RQS6 177 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 TBKBP1A7MCY6 615 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ARVCFO00192 962 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PEX1O43933 1283 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PRLP01236 227 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ALDOCP09972 364 aaKnown RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 NME5P56597 212 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 FOLH1Q04609 750 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 GEN1Q17RS7 908 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ALG1LQ6GMV1 187 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ANKS3Q6ZW76 656 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 CLYBLQ8N0X4 340 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 RAET1EQ8TD07 263 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PEX13Q92968 403 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 LRGUKQ96M69 825 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 ZNF599Q96NL3 588 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 KCNA7Q96RP8 456 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 UTP6Q9NYH9 597 aaKnown RBP11.95□□□□□ -0.5
TP53-227ENST00000622645 SEPT3Q9UH03 358 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 PCDHGC4Q9Y5F7 938 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 TET1Q8NFU7 2136 aa11.95□□□□□ -0.5
TP53-227ENST00000622645 A0A1B0GTL3 188 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 EME2A4GXA9 379 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 CBX4O00257 560 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SCAMP3O14828 347 aaKnown RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 COCHO43405 550 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TSPAN3O60637 253 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 PENKP01210 267 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 SNRPB2P08579 225 aaKnown RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 GFAPP14136 432 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 OR1D2P34982 312 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SLC11A2P49281 568 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SUOXP51687 545 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 OXCT1P55809 520 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 XIAPP98170 497 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 NFKB2Q00653 900 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 C5orf22Q49AR2 442 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 GLT6D1Q7Z4J2 308 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 BBS5Q8N3I7 341 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 DCUN1D1Q96GG9 259 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ATOH8Q96SQ7 321 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 PKP2Q99959 881 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SLC39A3Q9BRY0 314 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 AKTIPQ9H8T0 292 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 PDP2Q9P2J9 529 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 GALPQ9UBC7 116 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 RIMS3Q9UJD0 308 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ZNF840PA6NDX5 716 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 PRORSD1PA6NEY8 169 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 H7C4K7 107 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TRIM38O00635 465 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 INSIG1O15503 277 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 CRTAMO95727 393 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 OGNP20774 298 aaKnown RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 ZNF140P52738 457 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 CDH4P55283 916 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms