RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 VPS33AQ96AX1 596 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 CMTM5Q96DZ9 223 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 OMA1Q96E52 524 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 CDCA5Q96FF9 252 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 RBBP8Q99708 897 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 LRRC40Q9H9A6 602 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 LRRC4Q9HBW1 653 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 PLXNA1Q9UIW2 1896 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 A0A096LPK6 155 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZNF839A8K0R7 811 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZBTB14O43829 449 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 HUS1O60921 280 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 HSPA4LO95757 839 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 AMHP03971 560 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ERCC2P18074 760 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ITGAXP20702 1163 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 SPRP35270 261 aaPredicted RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 GJA5P36382 358 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 TAF6P49848 677 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 NFATC3Q12968 1075 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ADGRE1Q14246 886 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 SLC9B1Q4ZJI4 515 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 KIAA1841Q6NSI8 718 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 UGT3A1Q6NUS8 523 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ADGRG5Q8IZF4 528 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 OR10Z1Q8NGY1 313 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 SLC7A14Q8TBB6 771 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 HM13Q8TCT9 377 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 MAPK15Q8TD08 544 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 WNT8BQ93098 351 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 MFSD3Q96ES6 412 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 TOE1Q96GM8 510 aaKnown RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZNF347Q96SE7 839 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 MKRN2Q9H000 416 aaKnown RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 NANOGQ9H9S0 305 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 RIMS3Q9UJD0 308 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 PIN4Q9Y237 131 aaKnown RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZCWPW2A0A1B0GU75 182 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 OR5K3A6NET4 321 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 G3V2L1 256 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 NRP1O14786 923 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 NDUFS2O75306 463 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 DBTP11182 482 aaKnown RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 DARSP14868 501 aaKnown RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 TPH1P17752 444 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 ITIH1P19827 911 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 GRIA3P42263 894 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 HCAR3P49019 387 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 CENPAP49450 140 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 PGGT1BP53609 377 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 LIMK2P53671 638 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 DUSP7Q16829 419 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 PAQR9Q6ZVX9 377 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 RMND5BQ96G75 393 aaPredicted RBP12.47□□□□□ -0.41
LITAF-221ENST00000622633 TNIP3Q96KP6 325 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 BFARQ9NZS9 450 aa12.47□□□□□ -0.41
LITAF-221ENST00000622633 CCDC78A2IDD5 438 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 I6L893 689 aaPredicted RBP12.46□□□□□ -0.41
LITAF-221ENST00000622633 RNGTTO60942 597 aaKnown RBP12.46□□□□□ -0.41
LITAF-221ENST00000622633 AP2A1O95782 977 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 MYL4P12829 197 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 COX4I1P13073 169 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 NPR3P17342 541 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 ADRA1BP35368 520 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 MAGEA12P43365 314 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 POLR2GP62487 172 aaKnown RBP eCLIP12.46□□□□□ -0.41
LITAF-221ENST00000622633 MAPRE1Q15691 268 aaKnown RBP12.46□□□□□ -0.41
LITAF-221ENST00000622633 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 UTS2BQ765I0 119 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 TMEM135Q86UB9 458 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 CARM1Q86X55 608 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 TMEM126BQ8IUX1 230 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 SIX6OS1Q8N1H7 587 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 PAF1Q8N7H5 531 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 URGCPQ8TCY9 931 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 PPP1R36Q96LQ0 422 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 ZNF560Q96MR9 790 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 MED10Q9BTT4 135 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 FAM96AQ9H5X1 160 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 PACSIN3Q9UKS6 424 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 SLC8A2Q9UPR5 921 aa12.46□□□□□ -0.41
LITAF-221ENST00000622633 AP4S1Q9Y587 144 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms