RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 EVI5LQ96CN4 794 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 PCYT2Q99447 389 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 TMEM30AQ9NV96 361 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 SAGE1Q9NXZ1 904 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 RALYQ9UKM9 306 aaKnown RBP4.32□□□□□ -1.72
BRCA1-229ENST00000621897 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
BRCA1-229ENST00000621897 C16orf97H3BN30 126 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 SNAP23O00161 211 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 SEC14L5O43304 696 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 FTCDO95954 541 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 TMPOP42166 694 aaKnown RBP4.31□□□□□ -1.72
BRCA1-229ENST00000621897 CLCNKAP51800 687 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 SORDQ00796 357 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 SYT16Q17RD7 645 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 MRGPRG-AS1Q2M3A8 158 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 KCNT1Q5JUK3 1230 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 RRM2BQ7LG56 351 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 HAPLN4Q86UW8 402 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 C1orf87Q8N0U7 546 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 KCNH5Q8NCM2 988 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 OR13A1Q8NGR1 328 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 ZCCHC10Q8TBK6 192 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 LRRC8CQ8TDW0 803 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 USP13Q92995 863 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-229ENST00000621897 HVCN1Q96D96 273 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 CMKLR1Q99788 373 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 NDST4Q9H3R1 872 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 HINT3Q9NQE9 182 aaKnown RBP4.31□□□□□ -1.72
BRCA1-229ENST00000621897 LUZP4Q9P127 313 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 TBX20Q9UMR3 447 aa4.31□□□□□ -1.72
BRCA1-229ENST00000621897 A0A1W2PQM1 296 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 RRN3P2A6NIE6 340 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 NTN3O00634 580 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-229ENST00000621897 SH3BP5O60239 455 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 SEC31AO94979 1220 aaKnown RBP4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PAK4O96013 591 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-229ENST00000621897 IRF1P10914 325 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 CETPP11597 493 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 CORO1AP31146 461 aaKnown RBP4.3□□□□□ -1.72
BRCA1-229ENST00000621897 GLIPR1P48060 266 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 VAMP2P63027 116 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PHEXP78562 749 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 TRPC3Q13507 836 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 NAE1Q13564 534 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 GPR68Q15743 365 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PRICKLE4Q2TBC4 344 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 COL28A1Q2UY09 1125 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 STXBP5Q5T5C0 1151 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 SLC9C2Q5TAH2 1124 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PLEKHA7Q6IQ23 1121 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 CLEC4GQ6UXB4 293 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 KLHL29Q96CT2 875 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 KIF1BPQ96EK5 621 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 SLC41A2Q96JW4 573 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PLEKHA5Q9HAU0 1116 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 FBRSL1Q9HCM7 1045 aaKnown RBP4.3□□□□□ -1.72
BRCA1-229ENST00000621897 ABCF3Q9NUQ8 709 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 PADI1Q9ULC6 663 aa4.3□□□□□ -1.72
BRCA1-229ENST00000621897 FAM172BPA6NC97 362 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 ASPDHA6ND91 283 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 AKR1B15C9JRZ8 316 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 NCAM2O15394 837 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 HOXC11O43248 304 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 FGF17O60258 216 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 SLC22A3O75751 556 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 ATP1A1P05023 1023 aaKnown RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 CFC1P0CG37 223 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 MYOD1P15172 320 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 PAX3P23760 479 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 BDKRB2P30411 391 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 CCT5P48643 541 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 GNAQP50148 359 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 RAD23BP54727 409 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 DMP1Q13316 513 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 IRAK1BP1Q5VVH5 260 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 ZNF280DQ6N043 979 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 KCTD18Q6PI47 426 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 TRMT1LQ7Z2T5 733 aaKnown RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 FOXP4Q8IVH2 680 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-229ENST00000621897 HTRA1Q92743 480 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 KCND2Q9NZV8 630 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 MPP6Q9NZW5 540 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 SARDHQ9UL12 918 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 AMDHD2Q9Y303 409 aa4.29□□□□□ -1.72
BRCA1-229ENST00000621897 A0A1W2PS18 150 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 TSPAN4O14817 238 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 DDX5P17844 614 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 MCCP23508 829 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 ISL1P61371 349 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 BAK1Q16611 211 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 KRT24Q2M2I5 525 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 ACCSLQ4AC99 568 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms