RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ACSBG2Q5FVE4 666 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 TRABD2AQ86V40 505 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 SLITRK4Q8IW52 837 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 NAT16Q8N8M0 369 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 KAT8Q9H7Z6 458 aaKnown RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 IFT46Q9NQC8 304 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 PTBP2Q9UKA9 531 aaKnown RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 TFEBP19484 476 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 HTR2BP41595 481 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 MAGEA8P43361 318 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 TMEM17Q86X19 198 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 SLC7A5P1Q8MH63 180 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 SPATA20Q8TB22 786 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 INTS7Q9NVH2 962 aaKnown RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 SLC28A2O43868 658 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 MLYCDO95822 493 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 RASA1P20936 1047 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 STOMP27105 288 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 STXBP1P61764 594 aaKnown RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 SEMA5AQ13591 1074 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 GAD1Q99259 594 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 MXRA8Q9BRK3 442 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 ZNF471Q9BX82 626 aaPredicted RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 FAM126AQ9BYI3 521 aaPredicted RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 SNX15Q9NRS6 342 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 TIMM8BQ9Y5J9 83 aaPredicted RBP11.6□□□□□ -0.55
CLTC-215ENST00000621829 NUMA1Q14980 2115 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
CLTC-215ENST00000621829 CD2P06729 351 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 EFEMP1Q12805 493 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 TBRG1Q3YBR2 411 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 XKR5Q6UX68 686 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF548Q8NEK5 533 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 TAS2R3Q9NYW6 316 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 ERVV-1B6SEH8 477 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 RPS3P23396 243 aaKnown RBP eCLIP11.59□□□□□ -0.553e-7■■■■■ 28.7
CLTC-215ENST00000621829 MIPP30301 263 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ICAM3P32942 547 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 BATFQ16520 125 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 TIGD6Q17RP2 521 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 KATNAL2Q8IYT4 538 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 STAG3L4Q8TBR4 150 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 TSEN15Q8WW01 171 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF354BQ96LW1 612 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 BRD7Q9NPI1 651 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 F8VP50 259 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 RNASEH1O60930 286 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 RSL1D1O76021 490 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 MARCKSL1P49006 195 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 TAF6P49848 677 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 RAB10P61026 200 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 PCDH1Q08174 1060 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 KCNV1Q6PIU1 500 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 USP30Q70CQ3 517 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 IL22Q9GZX6 179 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 TLR8Q9NR97 1041 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 CKLFQ9UBR5 152 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF639Q9UID6 485 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 NKX2-5P52952 324 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 ADIGQ0VDE8 80 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 PRKG2Q13237 762 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 GPER1Q99527 375 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF649Q9BS31 505 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 SLC38A7Q9NVC3 462 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 KIF20BQ96Q89 1820 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 MED14O60244 1454 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 UGT2B17O75795 530 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 F8A1P23610 371 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF45Q02386 682 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 BAATQ14032 418 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 SRFBP1Q8NEF9 429 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 OR2T12Q8NG77 320 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 SAMD4AQ9UPU9 718 aaKnown RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 MC1RQ01726 317 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 CRY1Q16526 586 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 FRRS1Q6ZNA5 592 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 PTF1AQ7RTS3 328 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 SSX6Q7RTT6 188 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 FOXRED2Q8IWF2 684 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 ADGRF2Q8IZF7 708 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 KCNH7Q9NS40 1196 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 ZNF3P17036 446 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 KDELR1P24390 212 aa11.59□□□□□ -0.55
CLTC-215ENST00000621829 PTX3P26022 381 aaPredicted RBP11.59□□□□□ -0.55
CLTC-215ENST00000621829 UGT8Q16880 541 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms