RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PRAMEF14Q5SWL7 426 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 RAVER1Q8IY67 606 aaKnown RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 MINDY1Q8N5J2 469 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 SCAMP4Q969E2 229 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 TRIM44Q96DX7 344 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 KLHDC7BQ96G42 594 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 TBL1YQ9BQ87 522 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 C1QTNF7Q9BXJ2 289 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 DDX47Q9H0S4 455 aaKnown RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 RAB6BQ9NRW1 208 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PAK5Q9P286 719 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 FNDC3AQ9Y2H6 1198 aaKnown RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PLXNB3Q9ULL4 1909 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.29□□□□□ -0.12
CBWD3-217ENST00000621474 SYPP08247 313 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 CASQ1P31415 396 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 HMGCLP35914 325 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 FDFT1P37268 417 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 GRIA1P42261 906 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 SPINT3P49223 89 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 FNTAP49354 379 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 DPTQ07507 201 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 SHBQ15464 509 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 AGAP2Q99490 1192 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 GTPBP2Q9BX10 602 aaKnown RBP14.29□□□□□ -0.12
CBWD3-217ENST00000621474 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 ZDHHC5Q9C0B5 715 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 GAREM1Q9H706 876 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 LRRC40Q9H9A6 602 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 OR1A2Q9Y585 309 aa14.29□□□□□ -0.12
CBWD3-217ENST00000621474 SPTY2D1-AS1A0A0U1RR47 76 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 SUN1O94901 812 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 ACTN2P35609 894 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 RABIFP47224 123 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 C21orf59P57076 290 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 LMNB2Q03252 620 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 MTM1Q13496 603 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-217ENST00000621474 FZD2Q14332 565 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-217ENST00000621474 HENMT1Q5T8I9 393 aaKnown RBP14.28□□□□□ -0.12
CBWD3-217ENST00000621474 CCDC70Q6NSX1 233 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 PNCKQ6P2M8 343 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 GSTA5Q7RTV2 222 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 GPR26Q8NDV2 337 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 FAM174AQ8TBP5 190 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 BLOC1S5Q8TDH9 187 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 TMEM9BQ9NQ34 198 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 DNAAF2Q9NVR5 837 aaKnown RBP14.28□□□□□ -0.12
CBWD3-217ENST00000621474 PIH1D1Q9NWS0 290 aaKnown RBP14.28□□□□□ -0.12
CBWD3-217ENST00000621474 KLF15Q9UIH9 416 aa14.28□□□□□ -0.12
CBWD3-217ENST00000621474 GOLGA6L10A0A0M3HER8 536 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 C4orf47A7E2U8 309 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 ERI2A8K979 691 aaKnown RBP14.27□□□□□ -0.12
CBWD3-217ENST00000621474 SLC4A1P02730 911 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 LIMK1P53667 647 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 YPEL5P62699 121 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 IL27RAQ6UWB1 636 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 ZNF765Q7L2R6 523 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 GLT6D1Q7Z4J2 308 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 NLRP8Q86W28 1048 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 SLCO2A1Q92959 643 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 AP2M1Q96CW1 435 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 ELF4Q99607 663 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-217ENST00000621474 APOOQ9BUR5 198 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 TRABDQ9H4I3 376 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 ERVMER34-1Q9H9K5 563 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 GDF3Q9NR23 364 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 IL17CQ9P0M4 197 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 PCYOX1Q9UHG3 505 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 ARL5AQ9Y689 179 aa14.27□□□□□ -0.12
CBWD3-217ENST00000621474 SPTBN4Q9H254 2564 aa14.27□□□□□ -0.13
CBWD3-217ENST00000621474 PCNX2A6NKB5 2137 aa14.27□□□□□ -0.13
CBWD3-217ENST00000621474 CNOT1A5YKK6 2376 aaKnown RBP14.27□□□□□ -0.13
CBWD3-217ENST00000621474 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 A0A1B0GTQ1 180 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 TCRBV7S3A2A0A539 114 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GOLGA6CA6NDK9 693 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GOLGA6BA6NDN3 693 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 CER1O95813 267 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 KRT14P02533 472 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 APRTP07741 180 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 GOLGA6DP0CG33 693 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 BPIP17213 487 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 PTGIRP43119 386 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 VPS41P49754 854 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 EIF2B5Q13144 721 aaKnown RBP14.26□□□□□ -0.13
CBWD3-217ENST00000621474 PTPRCAPQ14761 206 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 STPG1Q5TH74 334 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 ZNF534Q76KX8 674 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 NRSN1Q8IZ57 195 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 OR52K1Q8NGK4 314 aa14.26□□□□□ -0.13
CBWD3-217ENST00000621474 CCHCR1Q8TD31 782 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms