RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GATMP50440 423 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 LBX1P52954 281 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 MED21Q13503 144 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CMPK2Q5EBM0 449 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OLFML2BQ68BL8 750 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF621Q6ZSS3 439 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OTOP3Q7RTS5 596 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 HORMAD1Q86X24 394 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 KRT78Q8N1N4 520 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 FEM1CQ96JP0 617 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 AGAP2Q99490 1192 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SYTL2Q9HCH5 934 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 S100A14Q9HCY8 104 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 H2AFY2Q9P0M6 372 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ASF1AQ9Y294 204 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SCN1AP35498 2009 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 ADCY6O43306 1168 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 TKTP29401 623 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SERPINH1P50454 418 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PGGT1BP53609 377 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC5A3P53794 718 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 VARS2Q5ST30 1063 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OR52E8Q6IFG1 317 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 LRRC8BQ6P9F7 803 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC26A9Q7LBE3 791 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 DHDDSQ86SQ9 333 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SPATA22Q8NHS9 363 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 GDPD5Q8WTR4 605 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PCED1BQ96HM7 432 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 NAT9Q9BTE0 207 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PDP2Q9P2J9 529 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 RAB23Q9ULC3 237 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 PSMD13Q9UNM6 376 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 EIF3LQ9Y262 564 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 CPQQ9Y646 472 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 SEC16AO15027 2179 aa8.29□□□□□ -1.08
PTPDC1-204ENST00000620992 OR2AG2A6NM03 316 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 AHCYL1O43865 530 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 AOC1P19801 751 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 PEX2P28328 305 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MAGEA3P43357 314 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MAGEA6P43360 314 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 PTPN9P43378 593 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SERPINB8P50452 374 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 CERCAMQ5T4B2 595 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 EFL1Q7Z2Z2 1120 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZDHHC17Q8IUH5 632 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 COLGALT2Q8IYK4 626 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF567Q8N184 647 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 DEFB119Q8N690 84 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF781Q8N8C0 355 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 OR6Y1Q8NGX8 325 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZSCAN18Q8TBC5 510 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ACMSDQ8TDX5 336 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 CXorf40BQ96DE9 158 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZYG11BQ9C0D3 744 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 IMPAD1Q9NX62 359 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MKS1Q9NXB0 559 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 KLF15Q9UIH9 416 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 NME7Q9Y5B8 376 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SPACA6W5XKT8 324 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ZBTB14O43829 449 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 LRATO95237 230 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 RPS24P62847 133 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 POLR2LP62875 67 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TRIM32Q13049 653 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM91A1Q658Y4 838 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FRMD7Q6ZUT3 714 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC41A1Q8IVJ1 513 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ST13P4Q8IZP2 240 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 IPCEF1Q8WWN9 437 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ESAMQ96AP7 390 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MFSD3Q96ES6 412 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 HSFY1Q96LI6 401 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 WDR55Q9H6Y2 383 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 CDH22Q9UJ99 828 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 KRT87PA6NCN2 255 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MGAMO43451 1857 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FESP07332 822 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 HNRNPLP14866 589 aaKnown RBP eCLIP8.28□□□□□ -1.081e-8■■■□□ 16.4
PTPDC1-204ENST00000620992 ETS2P15036 469 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 GRM5P41594 1212 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 WNT3AP56704 352 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 IRF9Q00978 393 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ARHGAP1Q07960 439 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TRAF2Q12933 501 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 INPP5AQ14642 412 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM187BQ17R55 369 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TXNDC8Q6A555 127 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TIFABQ6ZNK6 161 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms