RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 FAM210AQ96ND0 272 aa9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 PRPF18Q99633 342 aaKnown RBP9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 EBF3Q9H4W6 596 aa9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 TMEM248Q9NWD8 314 aa9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 ORC6Q9Y5N6 252 aa9.21□□□□□ -0.93
RBFOX1-223ENST00000620507 SAC3D1A6NKF1 404 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 UBXN8O00124 270 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 C1RP00736 705 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 MC4RP32245 332 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 KCNQ1P51787 676 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 RPS24P62847 133 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 SMAD3P84022 425 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 RALGDSQ12967 914 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 NOGQ13253 232 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 RPS27LQ71UM5 84 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 ACVR1CQ8NER5 493 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 DCUN1D1Q96GG9 259 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 CCDC138Q96M89 665 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 TMEM79Q9BSE2 394 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 THUMPD3Q9BV44 507 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 FAF1Q9UNN5 650 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 A0A0J9YYE9 177 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 CCDC154A6NI56 674 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 MLYCDO95822 493 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 XRCC1P18887 633 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 IMPDH1P20839 514 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 FASP25445 335 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 CORO1AP31146 461 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 AQP4P55087 323 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 PRSS55Q6UWB4 352 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 SAPCD2Q86UD0 394 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 PIM3Q86V86 326 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 ARHGAP12Q8IWW6 846 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 STK40Q8N2I9 435 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 ACOX2Q99424 681 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 GPR21Q99679 349 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 UNC93B1Q9H1C4 597 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 ZBTB26Q9HCK0 441 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 TMEM30AQ9NV96 361 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 POLG2Q9UHN1 485 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 SLC4A7Q9Y6M7 1214 aa9.21□□□□□ -0.94
RBFOX1-223ENST00000620507 MOXD2PA6NHM9 499 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ZNF839A8K0R7 811 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 STX16-NPEPL1H3BU86 382 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 RAD51BO15315 384 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 INSIG1O15503 277 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 PGM3O95394 542 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ITGBL1O95965 494 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 PKMP14618 531 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 RPL17P18621 184 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CES1P23141 567 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 MTTPP55157 894 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CDH4P55283 916 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 LRRC23Q53EV4 343 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CDYL2Q8N8U2 506 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 DNAJB14Q8TBM8 379 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 TWIST2Q8WVJ9 160 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 NMD3Q96D46 503 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 EIF3LQ9Y262 564 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 RAI2Q9Y5P3 530 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 AP4B1Q9Y6B7 739 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 KANSL1LA0AUZ9 987 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ZBBXA8MT70 800 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 A8MX80 341 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 TBL1XO60907 577 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 PAPSS2O95340 614 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 SIX3O95343 332 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 BCL2L1Q07817 233 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CYP51A1Q16850 503 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 TTC33Q6PID6 262 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 LINGO4Q6UY18 593 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 AMIGO2Q86SJ2 522 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CLEC4FQ8N1N0 589 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 LINGO1Q96FE5 620 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CDKN2AIPNLQ96HQ2 116 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 VPS50Q96JG6 964 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 C17orf80Q9BSJ5 609 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CHCHD3Q9NX63 227 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 PKD2L2Q9NZM6 624 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 TIMM22Q9Y584 194 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 SLC38A8A6NNN8 435 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 HHLA1C9JL84 531 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 LRG1P02750 347 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 HDCP19113 662 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 MAGEA11P43364 429 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ARHGEF7Q14155 803 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 TRIM25Q14258 630 aaKnown RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 PTPRCAPQ14761 206 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 HERC3Q15034 1050 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CST9Q5W186 159 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 IL27RAQ6UWB1 636 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 CENPLQ8N0S6 344 aaPredicted RBP9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ZNF786Q8N393 782 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 ADCY4Q8NFM4 1077 aa9.2□□□□□ -0.94
RBFOX1-223ENST00000620507 LPGAT1Q92604 370 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms