RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ARHGEF7Q14155 803 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LONRF1Q17RB8 773 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LRRC73Q5JTD7 316 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 PIP5KL1Q5T9C9 394 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LRRC66Q68CR7 880 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 PDPK2PQ6A1A2 396 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 KIAA0930Q6ICG6 404 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 NEPROQ6NW34 567 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 LIPIQ6XZB0 460 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 USP30Q70CQ3 517 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SPEM1Q8N4L4 309 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 FLCNQ8NFG4 579 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 OR4K2Q8NGD2 314 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 OR13C4Q8NGS5 318 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 UHMK1Q8TAS1 419 aaKnown RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SGSM3Q96HU1 749 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 DNAJC1Q96KC8 554 aaKnown RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 UHRF1Q96T88 793 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 CYTH2Q99418 400 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 OMDQ99983 421 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 TMEM109Q9BVC6 243 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ROPN1BQ9BZX4 212 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SLC6A17Q9H1V8 727 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ACSS3Q9H6R3 686 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ROPN1Q9HAT0 212 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 BPIFA1Q9NP55 256 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ITM2CQ9NQX7 267 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 C20orf96Q9NUD7 363 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF446Q9NWS9 450 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 PLAAQ9Y263 795 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 NCKAP1Q9Y2A7 1128 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 PKP3Q9Y446 797 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 FADS3Q9Y5Q0 445 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 SHROOM3Q8TF72 1996 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 COL4A3Q01955 1670 aa8.02□□□□□ -1.13
CPNE3-209ENST00000620393 COL6A3P12111 3177 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 A0A1W2PP55 124 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TCRBV21S2A2A0A5A6 115 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 CCDC162PA2VCL2 907 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 FAM159BA6NKW6 160 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 CXorf49A8MYA2 514 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 H7C0S8 307 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 PSMD11O00231 422 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 NEMP1O14524 444 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TSPAN6O43657 245 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 RNASEH2AO75792 299 aaKnown RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 SHBGP04278 402 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 C1SP09871 688 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 ERVK-10P10266 1014 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 ACADMP11310 421 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 BPIP17213 487 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 NDUFV2P19404 249 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 ARNTP27540 789 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 MMP12P39900 470 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 MAGEA9P43362 315 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 SPINT3P49223 89 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 LIG3P49916 1009 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TAS2R38P59533 333 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 PRAMEP78395 509 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 XIAPP98170 497 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 THOC5Q13769 683 aaKnown RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 KLHL38Q2WGJ6 581 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 KBTBD12Q3ZCT8 623 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TTC31Q49AM3 519 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 HSP90AA5PQ58FG0 334 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TEDDM1Q5T9Z0 273 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 AGBL4Q5VU57 503 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 ZDHHC20Q5W0Z9 365 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 HSD11B1LQ7Z5J1 315 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TECPR1Q7Z6L1 1165 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 KBTBD6Q86V97 674 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 NLRP8Q86W28 1048 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 NRSN1Q8IZ57 195 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 UNC5BQ8IZJ1 945 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 GPR150Q8NGU9 434 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 OR6P1Q8NGX9 317 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 OR2W6PQ8NHA6 318 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 DTX3LQ8TDB6 740 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 GANCQ8TET4 914 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 CERS2Q96G23 380 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 ZIM3Q96PE6 472 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 IER2Q9BTL4 223 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 MFSD1Q9H3U5 465 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 SUDS3Q9H7L9 328 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 IL26Q9NPH9 171 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 PPANQ9NQ55 473 aaKnown RBP8.01□□□□□ -1.13
CPNE3-209ENST00000620393 SMYD2Q9NRG4 433 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 RAD18Q9NS91 495 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 C2orf42Q9NWW7 574 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 VPS18Q9P253 973 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 SERGEFQ9UGK8 458 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 FETUBQ9UGM5 382 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 EBF1Q9UH73 591 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 APPL1Q9UKG1 709 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 FZD4Q9ULV1 537 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 TICRRQ7Z2Z1 1910 aa8.01□□□□□ -1.13
CPNE3-209ENST00000620393 COL4A2P08572 1712 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms