RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 AGO3Q9H9G7 860 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 PRM3Q9NNZ6 103 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 PNPLA3Q9NST1 481 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 HS3ST4Q9Y661 456 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 HHLA1C9JL84 531 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 GABRDO14764 452 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 NPHS1O60500 1241 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ZBTB11O95625 1053 aaPredicted RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 EEF1DP29692 281 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 SCNN1AP37088 669 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 CLCN2P51788 898 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 CBLBQ13191 982 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 SEMA3AQ14563 771 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ZNF678Q5SXM1 525 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 RANBP10Q6VN20 620 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 SNX29P2Q8IUI4 249 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 HS3ST5Q8IZT8 346 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 TCF12Q99081 682 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 SLC2A11Q9BYW1 496 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 INTS7Q9NVH2 962 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 OSER1Q9NX31 292 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 GALPQ9UBC7 116 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 SUCOQ9UBS9 1254 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 PRG3Q9Y2Y8 225 aaPredicted RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 ZFC3H1O60293 1989 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ZNF182P17025 639 aaPredicted RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 ITGB6P18564 788 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 IL10P22301 178 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 HSPA13P48723 471 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 EMP3P54852 163 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 UFM1P61960 85 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 PPIL2Q13356 520 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 FRG1Q14331 258 aaKnown RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
DKC1-213ENST00000620277 PAGE3Q5JUK9 113 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 MARC1Q5VT66 337 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 UGT3A1Q6NUS8 523 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 CARM1Q86X55 608 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 RANBP9Q96S59 729 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 TUBB1Q9H4B7 451 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 CXorf21Q9HAI6 301 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 ENTPD7Q9NQZ7 604 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 NSMCE4AQ9NXX6 385 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 PPP2R3BQ9Y5P8 575 aa16.03■□□□□ 0.16
DKC1-213ENST00000620277 IQCF5A8MTL0 148 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 CDC7O00311 574 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 GOT2P00505 430 aaKnown RBP16.02■□□□□ 0.16
DKC1-213ENST00000620277 KCNE1P15382 129 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 CCNCP24863 283 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 ACVRL1P37023 503 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 PSEN2P49810 448 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 TSNQ15631 228 aaKnown RBP16.02■□□□□ 0.16
DKC1-213ENST00000620277 SLC39A12Q504Y0 691 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 NHSL2Q5HYW2 709 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 TBPL2Q6SJ96 375 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 CILP2Q8IUL8 1156 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 GIPC3Q8TF64 312 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 MAELQ96JY0 434 aaKnown RBP16.02■□□□□ 0.16
DKC1-213ENST00000620277 SEMA3CQ99985 751 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 RTP3Q9BQQ7 232 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 ABCG8Q9H221 673 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 AASSQ9UDR5 926 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
DKC1-213ENST00000620277 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.16
DKC1-213ENST00000620277 A0A087X1B8 175 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 ARPC2O15144 300 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 FASP25445 335 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 PSMA4P25789 261 aaKnown RBP16.02■□□□□ 0.15
DKC1-213ENST00000620277 PFKPQ01813 784 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 GNA12Q03113 381 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 MAPRE2Q15555 327 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 RBBP7Q16576 425 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 IMPG1Q17R60 797 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 UGT3A2Q3SY77 523 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 PYCR3Q53H96 274 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 SGO1Q5FBB7 561 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 LARP4Q71RC2 724 aaKnown RBP eCLIP16.02■□□□□ 0.158e-9■■■□□ 16.6
DKC1-213ENST00000620277 PAF1Q8N7H5 531 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 CDYL2Q8N8U2 506 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 PCYOX1LQ8NBM8 494 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 PPP1R10Q96QC0 940 aaKnown RBP16.02■□□□□ 0.15
DKC1-213ENST00000620277 MEAF6Q9HAF1 191 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 TREX1Q9NSU2 369 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 IKZF3Q9UKT9 509 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 FADS3Q9Y5Q0 445 aa16.02■□□□□ 0.15
DKC1-213ENST00000620277 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
DKC1-213ENST00000620277 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
DKC1-213ENST00000620277 FUT4P22083 530 aa16.01■□□□□ 0.15
DKC1-213ENST00000620277 MTPNP58546 118 aa16.01■□□□□ 0.15
DKC1-213ENST00000620277 MERTKQ12866 999 aa16.01■□□□□ 0.15
DKC1-213ENST00000620277 SIRPB2Q5JXA9 342 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms