RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 PTPRNQ16849 979 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 BRAT1Q6PJG6 821 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 ZNF771Q7L3S4 317 aaPredicted RBP27.82■■■□□ 2.04
BRF1-221ENST00000619151 LYSMD3Q7Z3D4 306 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 GPATCH11Q8N954 259 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 SMIM14Q96QK8 99 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 TCF12Q99081 682 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 FAM107BQ9H098 131 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 IL17CQ9P0M4 197 aa27.82■■■□□ 2.04
BRF1-221ENST00000619151 COL6A3P12111 3177 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 OTOL1A6NHN0 477 aaPredicted RBP27.81■■■□□ 2.04
BRF1-221ENST00000619151 TCP11X1B4DZS4 312 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 RAB10P61026 200 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 TYSND1Q2T9J0 566 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 AARS2Q5JTZ9 985 aaKnown RBP27.81■■■□□ 2.04
BRF1-221ENST00000619151 CNSTQ6PJW8 725 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 TRIM42Q8IWZ5 723 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 TERB1Q8NA31 727 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 CHST14Q8NCH0 376 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 ST13P5Q8NFI4 369 aaPredicted RBP27.81■■■□□ 2.04
BRF1-221ENST00000619151 TRMT61BQ9BVS5 477 aaKnown RBP27.81■■■□□ 2.04
BRF1-221ENST00000619151 CAB39LQ9H9S4 337 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 MARCH4Q9P2E8 410 aaPredicted RBP27.81■■■□□ 2.04
BRF1-221ENST00000619151 LIMD1Q9UGP4 676 aa27.81■■■□□ 2.04
BRF1-221ENST00000619151 C1orf232A0A0U1RR37 186 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 S1PR4O95977 384 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 C2P06681 752 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 GDI1P31150 447 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 HNF1BP35680 557 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 SERPINB4P48594 390 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 STC1P52823 247 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 DBN1Q16643 649 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 RNF187Q5TA31 235 aaPredicted RBP27.8■■■□□ 2.04
BRF1-221ENST00000619151 NUDT18Q6ZVK8 323 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 CCDC91Q7Z6B0 441 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 SLC41A1Q8IVJ1 513 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 LRRC34Q8IZ02 419 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 ZNF473Q8WTR7 871 aaKnown RBP27.8■■■□□ 2.04
BRF1-221ENST00000619151 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.8■■■□□ 2.044e-6■■■■■ 41.2
BRF1-221ENST00000619151 SCRN2Q96FV2 425 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 RABEP2Q9H5N1 569 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 KCNK12Q9HB15 430 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 IL36AQ9UHA7 158 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 FKBPLQ9UIM3 349 aa27.8■■■□□ 2.04
BRF1-221ENST00000619151 KIAA1549LQ6ZVL6 1849 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 NEFHP12036 1026 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 COL6A2P12110 1019 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 SAT1P21673 171 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 DRD4P21917 467 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 MC4RP32245 332 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 GJA4P35212 333 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 CCDC153Q494R4 210 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 FNDC3BQ53EP0 1204 aaKnown RBP27.79■■■□□ 2.04
BRF1-221ENST00000619151 PPM1JQ5JR12 505 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 N4BP2L1Q5TBK1 243 aaPredicted RBP27.79■■■□□ 2.04
BRF1-221ENST00000619151 TPRG1Q6ZUI0 275 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 ARMC2Q8NEN0 867 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 GRIN3AQ8TCU5 1115 aa27.79■■■□□ 2.04
BRF1-221ENST00000619151 PRRT4C9JH25 899 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 BMP1P13497 986 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 TAC1P20366 129 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 FOXN2P32314 431 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 CSRP3P50461 194 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 ZP2Q05996 745 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 ZKSCAN8Q15776 578 aaPredicted RBP27.78■■■□□ 2.04
BRF1-221ENST00000619151 ITPRIPL2Q3MIP1 535 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 FAM45BPQ6NSW5 357 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 ZSWIM9Q86XI8 627 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 CCDC63Q8NA47 563 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 FAM45AQ8TCE6 357 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 HCAR2Q8TDS4 363 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 VOPP1Q96AW1 172 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 KLHL32Q96NJ5 620 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 ASB2Q96Q27 587 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 MCCC1Q96RQ3 725 aaPredicted RBP27.78■■■□□ 2.04
BRF1-221ENST00000619151 C12orf65Q9H3J6 166 aaKnown RBP27.78■■■□□ 2.04
BRF1-221ENST00000619151 SLC30A1Q9Y6M5 507 aa27.78■■■□□ 2.04
BRF1-221ENST00000619151 A0A087X1B8 175 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 OPRD1P41143 372 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 PHTF2Q8N3S3 785 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 BPIFA1Q9NP55 256 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 GTSE1Q9NYZ3 720 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 MID2Q9UJV3 735 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 APPL1Q9UKG1 709 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 ACOT9Q9Y305 439 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 WASF2Q9Y6W5 498 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 COL4A3Q01955 1670 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 EDDM13A0A1B0GTR0 161 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 TSPAN11A1L157 253 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 TBC1D3BA6NDS4 549 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 C19orf67A6NJJ6 358 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 BIRC5O15392 142 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 NDUFS3O75489 264 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 CYP2A6P11509 494 aaPredicted RBP27.77■■■□□ 2.04
BRF1-221ENST00000619151 TTPAP49638 278 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 KPNA2P52292 529 aaKnown RBP27.77■■■□□ 2.04
BRF1-221ENST00000619151 PTPN5P54829 565 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 E2F5Q15329 346 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 ZRANB3Q5FWF4 1079 aa27.77■■■□□ 2.04
BRF1-221ENST00000619151 HECTD2Q5U5R9 776 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms