RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ACOX1Q15067 660 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ALG11Q2TAA5 492 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 PROX2Q3B8N5 592 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 HENMT1Q5T8I9 393 aaKnown RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ANKRD20A3Q5VUR7 823 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 KCTD16Q68DU8 428 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 KCTD11Q693B1 232 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 DRICH1Q6PGQ1 229 aaPredicted RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 RANBP10Q6VN20 620 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 RFLNAQ6ZTI6 216 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 PID1Q7Z2X4 250 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 GATAD2AQ86YP4 633 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 SDR16C5Q8N3Y7 309 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ZNF548Q8NEK5 533 aaPredicted RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 LPCAT1Q8NF37 534 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 RHBDD1Q8TEB9 315 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 BTN2A2Q8WVV5 523 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 NUS1Q96E22 293 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 MS4A3Q96HJ5 214 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 COX14Q96I36 57 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 SPATA13Q96N96 652 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ALS2CR12Q96Q35 445 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 C19orf43Q9BQ61 176 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 MLPHQ9BV36 600 aaPredicted RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 LGR4Q9BXB1 951 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ABCG8Q9H221 673 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 ARNT2Q9HBZ2 717 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 UCKL1Q9NWZ5 548 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 SEPT10Q9P0V9 454 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 KLHL8Q9P2G9 620 aaPredicted RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 CNOT6Q9ULM6 557 aaKnown RBP8.24□□□□□ -1.09
NEK3-209ENST00000618856 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 TTLL3Q9Y4R7 772 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 SPO11Q9Y5K1 396 aa8.24□□□□□ -1.09
NEK3-209ENST00000618856 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 LY6G6EA0A0G2JKS1 128 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 SPAARA0A1B0GVQ0 90 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TMEM202A6NGA9 273 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TRIM38O00635 465 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 KCNN4O15554 427 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 NEBLO76041 1014 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TRIM16O95361 564 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 FUCA1P04066 466 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 PCCBP05166 539 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 CEACAM5P06731 702 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 PYGLP06737 847 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 HLA-DPA1P20036 260 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 ACP1P24666 158 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 HTR1BP28222 390 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 STIP1P31948 543 aaKnown RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 HMGCLP35914 325 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 HK3P52790 923 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 THOP1P52888 689 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 EPHB1P54762 984 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 GDF10P55107 478 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 GALNT3Q14435 633 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 GSE1Q14687 1217 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 SLC1A5Q15758 541 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 INAVAQ3KP66 663 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 ZNF542PQ5EBM4 170 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 SIRPB2Q5JXA9 342 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 ITPRIPL1Q6GPH6 555 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 DENND5AQ6IQ26 1287 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 DARS2Q6PI48 645 aaKnown RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 NYAP1Q6ZVC0 841 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 RASGEF1CQ8N431 466 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TTC30BQ8N4P2 665 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.23□□□□□ -1.09
NEK3-209ENST00000618856 SETD7Q8WTS6 366 aaKnown RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 ADAMTS14Q8WXS8 1223 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 WDR92Q96MX6 357 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 PPP1R2P1Q96PQ5 205 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 AGAP2Q99490 1192 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 FAM118BQ9BPY3 351 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 LRRC61Q9BV99 259 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 FRMD8Q9BZ67 464 aaPredicted RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 CLPBQ9H078 707 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 CDH19Q9H159 772 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TCEAL2Q9H3H9 227 aaPredicted RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 TRABDQ9H4I3 376 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 DNAJC28Q9NX36 388 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 NLGN3Q9NZ94 848 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 UBP1Q9NZI7 540 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 RSPH14Q9UHP6 348 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 TTC7AQ9ULT0 858 aaPredicted RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 SLC17A4Q9Y2C5 497 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 AAR2Q9Y312 384 aaKnown RBP8.23□□□□□ -1.09
NEK3-209ENST00000618856 JRKLQ9Y4A0 524 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 OR1A2Q9Y585 309 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 PCDHGA1Q9Y5H4 931 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 U3KQA8 63 aa8.23□□□□□ -1.09
NEK3-209ENST00000618856 SCN8AQ9UQD0 1980 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CHD8Q9HCK8 2581 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms