RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LENG8Q96PV6 779 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 GFM1Q96RP9 751 aaKnown RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 KLF6Q99612 283 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 HEPHQ9BQS7 1158 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 OSBPL1AQ9BXW6 950 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 TM6SF2Q9BZW4 377 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ATP13A1Q9HD20 1204 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 DCAF16Q9NXF7 216 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 IL20Q9NYY1 176 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 MPP6Q9NZW5 540 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ANKMY1Q9P2S6 941 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 PNMA8BQ9ULN7 279 aaPredicted RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
GPC6-202ENST00000617456 MFHAS1Q9Y4C4 1052 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 PCDHGA7Q9Y5G6 932 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 ACTL7AQ9Y615 435 aa8.62□□□□□ -1.03
GPC6-202ENST00000617456 UNC13CQ8NB66 2214 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 A0A1W2PQC6 194 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TCRBV5S1A1TA0A578 114 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 LMO7DNF2Z398 122 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 GOLGA8SH3BPF8 625 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 NTN3O00634 580 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 FGF10O15520 208 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 TTI1O43156 1089 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TSPAN6O43657 245 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 RAMP2O60895 175 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 KIAA0754O94854 1291 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 POP4O95707 220 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 GSRP00390 522 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TUBB4AP04350 444 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 ITGB2P05107 769 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 RPLP0P05388 317 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 PLEKP08567 350 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 SFTPCP11686 197 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 ITIH1P19827 911 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 GPD1P21695 349 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 RFC1P35251 1148 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 PPARDQ03181 441 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TLE1Q04724 770 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 COX10Q12887 443 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 PTK2BQ14289 1009 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 GRM3Q14832 879 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 NCAPHQ15003 741 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 POLD3Q15054 466 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 PARP15Q460N3 678 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
GPC6-202ENST00000617456 LRRC73Q5JTD7 316 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TRNP1Q6NT89 227 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 FBXO38Q6PIJ6 1188 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 WDR59Q6PJI9 974 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 MON1BQ7L1V2 547 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 PTRH1Q86Y79 214 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 PSTKQ8IV42 348 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 CCDC50Q8IVM0 306 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SAMD14Q8IZD0 417 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 Q8N9G6 341 aaPredicted RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 KYQ8NBH2 561 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 CCDC112Q8NEF3 446 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TRPC4APQ8TEL6 797 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 ARHGEF2Q92974 986 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 TBC1D31Q96DN5 1066 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 IQCDQ96DY2 449 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 AGPAT1Q99943 283 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 CNPY3Q9BT09 278 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SELENOOQ9BVL4 669 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 CPEB1Q9BZB8 566 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 CLPBQ9H078 707 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 MRPL46Q9H2W6 279 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 VCX3BQ9H321 246 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 CATSPERBQ9H7T0 1116 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 METTL5Q9NRN9 209 aaKnown RBP8.61□□□□□ -1.03
GPC6-202ENST00000617456 TMPRSS4Q9NRS4 437 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SEPT10Q9P0V9 454 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 LOXL2Q9Y4K0 774 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
GPC6-202ENST00000617456 USP9XQ93008 2570 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 PRAMEF33A0A0G2JMD5 474 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 FAM170AA1A519 330 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 D6RAR5 112 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 TMX2-CTNND1H3BSU7 103 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 KDELR3O43731 214 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PRAMEF10O60809 474 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 MMP20O60882 483 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 LRIG2O94898 1065 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 NTRK1P04629 796 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 LIPCP11150 499 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 ATP1A3P13637 1013 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 CTSEP14091 401 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms