RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LYSMD4Q5XG99 296 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 ZDHHC24Q6UX98 284 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 NRSN1Q8IZ57 195 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 PDIK1LQ8N165 341 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 MPP5Q8N3R9 675 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 PPHLN1Q8NEY8 458 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 OR4K2Q8NGD2 314 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 OR13C4Q8NGS5 318 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 SCAMP4Q969E2 229 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 NUS1Q96E22 293 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 DTD2Q96FN9 168 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 SIGLEC10Q96LC7 697 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 RANBP9Q96S59 729 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 ORAI3Q9BRQ5 295 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 C1QTNF7Q9BXJ2 289 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 IRF2BPLQ9H1B7 796 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 MIR1-1HGQ9H1L0 117 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 ABCG8Q9H221 673 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 EPC1Q9H2F5 836 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 GDF3Q9NR23 364 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 CA5BQ9Y2D0 317 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 TCAF1Q9Y4C2 921 aa15.59■□□□□ 0.09
PCDHGC3-204ENST00000617222 RGSL1A5PLK6 1076 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 MROH6A6NGR9 719 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 BANF1O75531 89 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 BPIP17213 487 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 HNRNPA2B1P22626 353 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 ITPKAP23677 461 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 AKT2P31751 481 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZNF140P52738 457 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 PDE1BQ01064 536 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 DHX9Q08211 1270 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 LRRC14Q15048 493 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 AGERQ15109 404 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 ALS2CLQ60I27 953 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 CASC4Q6P4E1 433 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 CYP2U1Q7Z449 544 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 IFT20Q8IY31 132 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 RAVER1Q8IY67 606 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 AGGF1Q8N302 714 aaeCLIP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZCCHC9Q8N567 271 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 TP53I13Q8NBR0 393 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 GPR26Q8NDV2 337 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 FBXO25Q8TCJ0 367 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 STYXQ8WUJ0 223 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 DNASE2BQ8WZ79 361 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 CENPTQ96BT3 561 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 AP2M1Q96CW1 435 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 SERAC1Q96JX3 654 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 DNAJC1Q96KC8 554 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 LENG8Q96PV6 779 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 KLF6Q99612 283 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 RIOK2Q9BVS4 552 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 KCNH6Q9H252 994 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 FAM83DQ9H4H8 585 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 MBNL1Q9NR56 388 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 CHRAC1Q9NRG0 131 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 RAD18Q9NS91 495 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 KCTD5Q9NXV2 234 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 DMTF1Q9Y222 760 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 MAD1L1Q9Y6D9 718 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 SLCO1B1Q9Y6L6 691 aa15.58■□□□□ 0.08
PCDHGC3-204ENST00000617222 EML5Q05BV3 1969 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 MAGEB16A2A368 324 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 PRAMEF26H0Y7S4 382 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 CCL22O00626 93 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 PPFIA2O75334 1257 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 PCCBP05166 539 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 CARSP49589 748 aaKnown RBP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 CLDN2P57739 230 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 TUBB4BP68371 445 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 IRF4Q15306 451 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 HIF1AQ16665 826 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SKIDA1Q1XH10 827 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 HP1BP3Q5SSJ5 553 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 TSTD2Q5T7W7 516 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 CES3Q6UWW8 571 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 NLRP9Q7RTR0 991 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZNF778Q96MU6 729 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SLC6A18Q96N87 628 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 AGAP2Q99490 1192 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 KIFC1Q9BW19 673 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 ZDHHC18Q9NUE0 388 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 FAM86C1Q9NVL1 165 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 NLE1Q9NVX2 485 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SAMD15Q9P1V8 674 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SLC2A6Q9UGQ3 507 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 FKBPLQ9UIM3 349 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 RAB23Q9ULC3 237 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 HS3ST3A1Q9Y663 406 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 V9GYY5 206 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 SDK1Q7Z5N4 2213 aa15.57■□□□□ 0.08
PCDHGC3-204ENST00000617222 GON4LQ3T8J9 2241 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 NMBRP28336 390 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 IGFALSP35858 605 aa15.56■□□□□ 0.08
PCDHGC3-204ENST00000617222 SPAM1P38567 509 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms