RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KCNMB4Q86W47 210 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 C7orf25Q9BPX7 421 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 TRPS1Q9UHF7 1281 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-248ENST00000616053 HHIPL2Q6UWX4 724 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ADHFE1Q8IWW8 467 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 C19orf25Q9UFG5 118 aaPredicted RBP12.65□□□□□ -0.38
TCF4-248ENST00000616053 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ACTL7BQ9Y614 415 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 FFAR3O14843 346 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 GPR42O15529 346 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CSF2P04141 144 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ALDH5A1P51649 535 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 CRHR2Q13324 411 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SULT1C3Q6IMI6 304 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 POC1BQ8TC44 478 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 AP3S1Q92572 193 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CHCHD6Q9BRQ6 235 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 TKTL2Q9H0I9 626 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 AP3M1Q9Y2T2 418 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 hCG_1807616A0A1W2PRN6 198 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 COMTP21964 271 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SLC6A2P23975 617 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CRISP1P54107 249 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SCN1BQ07699 218 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ZNF280BQ86YH2 543 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PTERQ96BW5 349 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ETS1P14921 441 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 FSHRP23945 695 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CNTFP26441 200 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ADAM8P78325 824 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 FASTKQ14296 549 aaKnown RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 GRM3Q14832 879 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 NXPE2Q96DL1 559 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CPSF4LA6NMK7 179 aaKnown RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 PTX3P26022 381 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 MAGEA2P43356 314 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 MLLT1Q03111 559 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 OASLQ15646 514 aaKnown RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 RAB30Q15771 203 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ACAD10Q6JQN1 1059 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 MR1Q95460 341 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 METTL7AQ9H8H3 244 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ING4Q9UNL4 249 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 NINQ8N4C6 2090 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 A8MUA0 341 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PTPRAP18433 802 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 DUSP3P51452 185 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 PAOXQ6QHF9 649 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 LGMNQ99538 433 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SEMA4BQ9NPR2 832 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 TOPBP1Q92547 1522 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 A6NLC8 198 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PHGDHO43175 533 aaKnown RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 CXCL8P10145 99 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 CTPS1P17812 591 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 PAX7P23759 505 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 NPLQ9BXD5 320 aaPredicted RBP12.64□□□□□ -0.39
TCF4-248ENST00000616053 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 HHLA1C9JL84 531 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SBK1Q52WX2 424 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 ECHDC2Q86YB7 292 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 GAL3ST1Q99999 423 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
TCF4-248ENST00000616053 S100A2P29034 98 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 NKAPLQ5M9Q1 402 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 ANXA8L1Q5VT79 327 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 UNQ6126/PRO20091Q6UXV3 157 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 SLC25A36Q96CQ1 311 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
TCF4-248ENST00000616053 ISPDA4D126 451 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms