RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CMTM6Q9NX76 183 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 ZNHIT2Q9UHR6 403 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 UBFD1O14562 309 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 DYNC1LI2O43237 492 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 ZNF286BP0CG31 522 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PABPC1P11940 636 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 CPB1P15086 417 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.31e-10■■□□□ 13.6
MSH6-214ENST00000616033 MATKP42679 507 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 GSSP48637 474 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 MAXP61244 160 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 GRM1Q13255 1194 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 RFTN1Q14699 578 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 HERC3Q15034 1050 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 NIPAL1Q6NVV3 410 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 CADM3Q8N126 398 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 ABHD11Q8NFV4 315 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 FBXO30Q8TB52 745 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 CSF3RQ99062 836 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 OLFM1Q99784 485 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 WDR6Q9NNW5 1121 aaKnown RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
MSH6-214ENST00000616033 FBXO5Q9UKT4 447 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 TNFSF13BQ9Y275 285 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
MSH6-214ENST00000616033 M0R3G1 203 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 DPYSL4O14531 572 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CLPXO76031 633 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 GFAPP14136 432 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 AGXTP21549 392 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 KCNC1P48547 511 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 LAPTM4AQ15012 233 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 ZCCHC7Q8N3Z6 543 aaKnown RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 C19orf60Q96EN9 201 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 IL12RB2Q99665 862 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 MAP10Q9P2G4 905 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 H0Y858 1186 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 KPNA4O00629 521 aaPredicted RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 PIRTP0C851 137 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CYP2C9P11712 490 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 BMP2P12643 396 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 HPCAL1P37235 193 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 SNX16P57768 344 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CD300AQ9UGN4 299 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CPA4Q9UI42 421 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 SYCE1LA8MT33 242 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CYP4B1P13584 511 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CYP2B6P20813 491 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 GGT5P36269 586 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 LIPEQ05469 1076 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 CYBRD1Q53TN4 286 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 DHRS4L2Q6PKH6 230 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 MRPL57Q9BQC6 102 aaKnown RBP13.16□□□□□ -0.3
MSH6-214ENST00000616033 CHID1Q9BWS9 393 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 TRIM15Q9C019 465 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.16□□□□□ -0.3
MSH6-214ENST00000616033 GIN1Q9NXP7 522 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 MGAMO43451 1857 aa13.16□□□□□ -0.3
MSH6-214ENST00000616033 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 INMTO95050 263 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 NADKO95544 446 aaPredicted RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 TGFBR1P36897 503 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 GLUD2P49448 558 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 GSK3BP49841 420 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 TKTL1P51854 596 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 PLA2G16P53816 162 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 NAPEPLDQ6IQ20 393 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 PRM3Q9NNZ6 103 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 ANAPC2Q9UJX6 822 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 TCAF1Q9Y4C2 921 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms