RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 HLFQ16534 295 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 TSTQ16762 297 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ANKDD1AQ495B1 522 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ACAD10Q6JQN1 1059 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 RPUSD3Q6P087 351 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 TMEM71Q6P5X7 295 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 KLHL24Q6TFL4 600 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 IL27RAQ6UWB1 636 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 Q6ZSV7 163 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 RNF144BQ7Z419 303 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 SLFN11Q7Z7L1 901 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 PATL1Q86TB9 770 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZNF329Q86UD4 541 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 MOGAT3Q86VF5 341 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ARMC8Q8IUR7 673 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 WDR63Q8IWG1 891 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 VPS52Q8N1B4 723 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 SRBD1Q8N5C6 995 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 NGEFQ8N5V2 710 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 C10orf53Q8N6V4 93 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 HORMAD2Q8N7B1 307 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 OR14A16Q8NHC5 309 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 LILRB1Q8NHL6 650 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 MOSPD2Q8NHP6 518 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 CTCFLQ8NI51 663 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 C2CD4CQ8TF44 421 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 GIMAP1Q8WWP7 306 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 THAP4Q8WY91 577 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 HERVK_113Q902F9 699 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ST8SIA4Q92187 359 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 NCSTNQ92542 709 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 USP6NLQ92738 828 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ATP6V0A1Q93050 837 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 EXOC4Q96A65 974 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 KTI12Q96EK9 354 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 APOLD1Q96LR9 279 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 FAM210AQ96ND0 272 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 RUNDC3BQ96NL0 473 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 GSDMAQ96QA5 445 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 PAIP1Q9H074 479 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 CLPBQ9H078 707 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 CDT1Q9H211 546 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 PFDN4Q9NQP4 134 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 TRMT1Q9NXH9 659 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 UTP6Q9NYH9 597 aaKnown RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZNF624Q9P2J8 865 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 MORF4L1Q9UBU8 362 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 KLQ9UEF7 1012 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 CDH22Q9UJ99 828 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 ANAPC5Q9UJX4 755 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 TBX20Q9UMR3 447 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 DHDHQ9UQ10 334 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 RCE1Q9Y256 329 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 AP1M2Q9Y6Q5 423 aa2.7□□□□□ -1.98
HMGB1P24-202ENST00000615653 A0A087WYN8 130 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 A0A096LPK6 155 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 A0A1B0GVT2 93 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 HMX3A6NHT5 357 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 B9A039 149 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 E7EVH7 732 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 I6L893 689 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 CAPN9O14815 690 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 WDR46O15213 610 aaKnown RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 LDB2O43679 373 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZBTB14O43829 449 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 HBP1O60381 514 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 SNX4O95219 450 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 PAPSS2O95340 614 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 CYP21A2P08686 494 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 CSH1P0DML2 217 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 CSH2P0DML3 217 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 SFTPCP11686 197 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 NEFHP12036 1026 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 ACP5P13686 325 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 GAP43P17677 238 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 RFC1P35251 1148 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 KRT2P35908 639 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 GJC1P36383 396 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 RGS2P41220 211 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 RFX5P48382 616 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 AARSP49588 968 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 RRP1P56182 461 aaKnown RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 IL1RL1Q01638 556 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 MC1RQ01726 317 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 CREB5Q02930 508 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 DMTNQ08495 405 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 GOLGA8FQ08AF8 430 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 EPS8Q12929 822 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 STK4Q13043 487 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 NFATC4Q14934 902 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 MORF4L2Q15014 288 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 PPA1Q15181 289 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZNF674Q2M3X9 581 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZNF284Q2VY69 593 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 SYTL3Q4VX76 610 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 TCP11X2Q5H9J9 407 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 NAA35Q5VZE5 725 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 TBC1D9BQ66K14 1250 aa2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 JMJD6Q6NYC1 403 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P24-202ENST00000615653 IYDQ6PHW0 289 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms