RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PEX6Q13608 980 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 PNPLA1Q8N8W4 532 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 TXNDC5Q8NBS9 432 aaKnown RBP20.23■□□□□ 0.83
CPNE9-205ENST00000613455 OR4L1Q8NH43 312 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 CD248Q9HCU0 757 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 TXNDC16Q9P2K2 825 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 FBXO5Q9UKT4 447 aa20.23■□□□□ 0.83
CPNE9-205ENST00000613455 A0A1W2PPM1 405 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 A0A1W2PQF6 199 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 C19orf67A6NJJ6 358 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 GAPDHSO14556 408 aaPredicted RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 KRT37O76014 449 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 KRT38O76015 456 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 AHSGP02765 367 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 SNRPAP09012 282 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 C1SP09871 688 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 PRSS56P0CW18 603 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CYP2A6P11509 494 aaPredicted RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 BPIP17213 487 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 KRT15P19012 456 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 FOXN2P32314 431 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CSE1LP55060 971 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 SATB1Q01826 763 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 SEMA3AQ14563 771 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 FBXO43Q4G163 708 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 GRTP1Q5TC63 336 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 KIAA0408Q6ZU52 694 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 DPPA4Q7L190 304 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 TRMT11Q7Z4G4 463 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 SRRM1Q8IYB3 904 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 GPR150Q8NGU9 434 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CATSPERZQ9NTU4 200 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CA14Q9ULX7 337 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ITM2BQ9Y287 266 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 TRIM49D1C9J1S8 452 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 MAN2B1O00754 1011 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CD3EAPO15446 510 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ITGA2BP08514 1039 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ADRB3P13945 408 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 HOXB2P14652 356 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CREB1P16220 341 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ZNF30P17039 623 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 COL9A1P20849 921 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 XPAP23025 273 aaPredicted RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CNTFP26441 200 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 MC4RP32245 332 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ABCG1P45844 678 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 STC1P52823 247 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 LIMK2P53671 638 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 MROH9Q5TGP6 573 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 SDE2Q6IQ49 451 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 ZC3HC1Q86WB0 502 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 CACUL1Q86Y37 369 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 LMNTD2Q8IXW0 634 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 PBXIP1Q96AQ6 731 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 HDAC8Q9BY41 377 aa20.22■□□□□ 0.83
CPNE9-205ENST00000613455 NDRG2Q9UN36 371 aaKnown RBP20.22■□□□□ 0.83
CPNE9-205ENST00000613455 LRRK1Q38SD2 2015 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 MID1O15344 667 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 NFKBIAP25963 317 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 DRD3P35462 400 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 STARD3Q14849 445 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 CST6Q15828 149 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 FAM46CQ5VWP2 391 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 FBXL19Q6PCT2 694 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 RFLNAQ6ZTI6 216 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 ERN2Q76MJ5 926 aaKnown RBP20.21■□□□□ 0.83
CPNE9-205ENST00000613455 TAOK1Q7L7X3 1001 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 GALNT7Q86SF2 657 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 LDB1Q86U70 411 aaPredicted RBP20.21■□□□□ 0.83
CPNE9-205ENST00000613455 ZNF687Q8N1G0 1237 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 AADATQ8N5Z0 425 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 OTUD6BQ8N6M0 293 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 OR2T3Q8NH03 318 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 RPLP0P6Q8NHW5 317 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 MTBPQ96DY7 904 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 ATXN7L3BQ96GX2 97 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 MKRN2Q9H000 416 aaKnown RBP20.21■□□□□ 0.83
CPNE9-205ENST00000613455 RHOJQ9H4E5 214 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 FBXO6Q9NRD1 293 aaPredicted RBP20.21■□□□□ 0.83
CPNE9-205ENST00000613455 FNDC3AQ9Y2H6 1198 aaKnown RBP20.21■□□□□ 0.83
CPNE9-205ENST00000613455 ACTL7BQ9Y614 415 aa20.21■□□□□ 0.83
CPNE9-205ENST00000613455 AREL1O15033 823 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 GPR39O43194 453 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 OGNP20774 298 aaKnown RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 HPDP32754 393 aaPredicted RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 SPRP35270 261 aaPredicted RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 P2RY2P41231 377 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 LEPRP48357 1165 aaKnown RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 CDKN1CP49918 316 aaPredicted RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 NEK3P51956 506 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 CNTN1Q12860 1018 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 ARHGEF7Q14155 803 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 ZNF789Q5FWF6 425 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 LGSNQ5TDP6 509 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 ZNF776Q68DI1 518 aaPredicted RBP20.2■□□□□ 0.82
CPNE9-205ENST00000613455 MRNIPQ6NTE8 343 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 ERAP2Q6P179 960 aa20.2■□□□□ 0.82
CPNE9-205ENST00000613455 FAM151BQ6UXP7 276 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms