RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 TIGD4Q8IY51 512 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 KNTC1P50748 2209 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CYB561D2O14569 222 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 PPP3CAQ08209 521 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SPP2Q13103 211 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 VPS26BQ4G0F5 336 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 TMED8Q6PL24 325 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SHC4Q6S5L8 630 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RBM4BQ9BQ04 359 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RBM4Q9BWF3 364 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ZNF717Q9BY31 904 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RNF38Q9H0F5 515 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ATP13A1Q9HD20 1204 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 H0YJX3 145 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 GCATO75600 419 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 MLYCDO95822 493 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ANPEPP15144 967 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 IGFBP4P22692 258 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ARCN1P48444 511 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CAPZA1P52907 286 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ELF3P78545 371 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SCGB2B2Q4G0G5 96 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 AARDQ4LEZ3 155 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 FIP1L1Q6UN15 594 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SPATA22Q8NHS9 363 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 TDRD3Q9H7E2 651 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 C19orf12Q9NSK7 152 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 KLRC1P26715 233 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 MMP13P45452 471 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RFTN2Q52LD8 501 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ARSKQ6UWY0 536 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 UBR7Q8N806 425 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 HEXDCQ8WVB3 486 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CDH19Q9H159 772 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 POLR3HQ9Y535 204 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 A0A1B0GVC2 190 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 C17orf102A2RUQ5 167 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SMAD9O15198 467 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 B3GAT3O94766 335 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 FAM86B2P0C5J1 330 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 HOXB8P17481 243 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 TGM6O95932 706 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CATP04040 527 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 FESP07332 822 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 TPH1P17752 444 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 VAMP1P23763 118 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SERPINA4P29622 427 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RETSATQ6NUM9 610 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 XPNPEP3Q9NQH7 507 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 MALT1Q9UDY8 824 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 ATP10AO60312 1499 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 WASHC1A8K0Z3 465 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 WASH3PC4AMC7 463 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 RP2O75695 350 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 CSN2P05814 226 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 WASH2PQ6VEQ5 465 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SPOCD1Q6ZMY3 1216 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 AMIGO2Q86SJ2 522 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 JSRP1Q96MG2 331 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-206ENST00000613296 SEC14L3Q9UDX4 400 aa8.38□□□□□ -1.07
ALMS1-206ENST00000613296 AURKAO14965 403 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 HOXC8P31273 242 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 IRF8Q02556 426 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 TAF1CQ15572 869 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-206ENST00000613296 CPTPQ5TA50 214 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 TMEM110Q86TL2 294 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 TBC1D21Q8IYX1 336 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ZSWIM3Q96MP5 696 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 LRMDAQ9H2I8 198 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 SNAPC2Q13487 334 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 EPHA7Q15375 998 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 PTPN20Q4JDL3 420 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ANXA8L1Q5VT79 327 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 CYB5R4Q7L1T6 521 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ECHDC2Q86YB7 292 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 FAM47BQ8NA70 645 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ATP6V1C2Q8NEY4 427 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ACTL9Q8TC94 416 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 NOL11Q9H8H0 719 aaKnown RBP8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 DCP1AQ9NPI6 582 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-206ENST00000613296 RBM22Q9NW64 420 aaKnown RBP eCLIP8.37□□□□□ -1.07
ALMS1-206ENST00000613296 FDX1P10109 184 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 CFL1P23528 166 aaKnown RBP8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ADRA1DP25100 572 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 TMBIM6P55061 237 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 CERCAMQ5T4B2 595 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 CENPSQ8N2Z9 138 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 DNAAF1Q8NEP3 725 aa8.37□□□□□ -1.07
ALMS1-206ENST00000613296 OR7D4Q8NG98 312 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms