RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MAGEA6P43360 314 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SLC18A1P54219 525 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TAS2R38P59533 333 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 GPX6P59796 221 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MAXP61244 160 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 POLR2LP62875 67 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ITKQ08881 620 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 KCNJ11Q14654 390 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PRKD1Q15139 912 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TEX44Q53QW1 395 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 GKAP1Q5VSY0 366 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 DARS2Q6PI48 645 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PIGWQ7Z7B1 504 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CPLX4Q7Z7G2 160 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TTC7BQ86TV6 843 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PRPF39Q86UA1 669 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ALYREFQ86V81 257 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TRIM69Q86WT6 500 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CAMK1DQ8IU85 385 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CEP76Q8TAP6 659 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 BIRC7Q96CA5 298 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 IL12RB2Q99665 862 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FERMT1Q9BQL6 677 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 WDR83Q9BRX9 315 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 DHRS4Q9BTZ2 278 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 VPS45Q9NRW7 570 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PAK5Q9P286 719 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 RABGEF1Q9UJ41 708 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ZNF292O60281 2723 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 WDR87Q6ZQQ6 2873 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 A0A1W2PPC4 97 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 PRR5-ARHGAP8B1AHC4 643 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 GOLGA8MH3BSY2 632 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 TRAFD1O14545 582 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-217ENST00000611848 HTRA2O43464 458 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-217ENST00000611848 TSPAN6O43657 245 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 HLA-DQB2P05538 268 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 TIMP2P16035 220 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 NFKBIAP25963 317 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 CD27P26842 260 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 MAOBP27338 520 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 PHBP35232 272 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 ELP6Q0PNE2 266 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 ZBTB17Q13105 803 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 CSRP2Q16527 193 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 UGP2Q16851 508 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 DUOXA1Q1HG43 343 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 KIAA1161Q6NSJ0 714 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 C4orf22Q6V702 233 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 PPP1R21Q6ZMI0 780 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 TRABD2AQ86V40 505 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 ZC3H18Q86VM9 953 aaKnown RBP8.86□□□□□ -0.99
SMAD4-217ENST00000611848 LRRC34Q8IZ02 419 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 CACNA2D3Q8IZS8 1091 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 PDIK1LQ8N165 341 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 DCLK2Q8N568 766 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 PYROXD1Q8WU10 500 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 LRRN4Q8WUT4 740 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 CKAP2Q8WWK9 683 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SNX19Q92543 992 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 ECHDC3Q96DC8 303 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 FEM1CQ96JP0 617 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 VAT1Q99536 393 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SEMA3CQ99985 751 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-217ENST00000611848 VPS37BQ9H9H4 285 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 NOD2Q9HC29 1040 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SEMA4GQ9NTN9 838 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 TMEM74BQ9NUR3 256 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SENP1Q9P0U3 644 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 SEPT10Q9P0V9 454 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 EIF2B4Q9UI10 523 aaKnown RBP8.86□□□□□ -0.99
SMAD4-217ENST00000611848 FADS3Q9Y5Q0 445 aa8.86□□□□□ -0.99
SMAD4-217ENST00000611848 CEP250Q9BV73 2442 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 A0A1B0GTW7 788 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 TTC24A2A3L6 582 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 FOXO6A8MYZ6 492 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 UPK3BL1B0FP48 263 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 UPK3BL2E5RIL1 263 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ANKRD65E5RJM6 399 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 H7C0C1 242 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 NEMP1O14524 444 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 AREL1O15033 823 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 KHNYNO15037 678 aaKnown RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PRPF4O43172 522 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 LATO43561 262 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 RNGTTO60942 597 aaKnown RBP8.85□□□□□ -0.99
SMAD4-217ENST00000611848 BANF1O75531 89 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 GJB3O75712 270 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 KIAA0754O94854 1291 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PCDH8O95206 1070 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 IGHV4-34P06331 123 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 SERPINF2P08697 491 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 TGM1P22735 817 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 CA4P22748 312 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 PTPN3P26045 913 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ABL2P42684 1182 aa8.85□□□□□ -0.99
SMAD4-217ENST00000611848 ATP5OP48047 213 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms