RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 ASCL3Q9NQ33 180 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 THSD1Q9NS62 852 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
MUC1-224ENST00000611577 JRKLQ9Y4A0 524 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 PCDHGC4Q9Y5F7 938 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 U3KQA8 63 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 COL6A6A6NMZ7 2263 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 TDRD6O60522 2096 aaKnown RBP17.72■□□□□ 0.43
MUC1-224ENST00000611577 A0A1W2PQ67 120 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 SCAMP1O15126 338 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 SOCS5O75159 536 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 RBP3P10745 1247 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 CR2P20023 1033 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 ABL2P42684 1182 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 SUOXP51687 545 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 HNRNPKP61978 463 aaKnown RBP eCLIP17.72■□□□□ 0.434e-6■■□□□ 12.2
MUC1-224ENST00000611577 ELP6Q0PNE2 266 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 C3orf38Q5JPI3 329 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 LRRC73Q5JTD7 316 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 ARMC12Q5T9G4 340 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 SLC35F6Q8N357 371 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 ZNF548Q8NEK5 533 aaPredicted RBP17.72■□□□□ 0.43
MUC1-224ENST00000611577 HTR3CQ8WXA8 447 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 FEM1CQ96JP0 617 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 VAT1Q99536 393 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 TLR10Q9BXR5 811 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 ATP8A1Q9Y2Q0 1164 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 FADS3Q9Y5Q0 445 aa17.72■□□□□ 0.43
MUC1-224ENST00000611577 USP27XA6NNY8 438 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 TSPAN6O43657 245 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 CEP104O60308 925 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 ZNF189O75820 626 aaPredicted RBP17.71■□□□□ 0.43
MUC1-224ENST00000611577 CPP00450 1065 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 PTPN3P26045 913 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 EPHB1P54762 984 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 UGP2Q16851 508 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 ISXQ2M1V0 245 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 TMEM259Q4ZIN3 620 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 TEX44Q53QW1 395 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 KYAT3Q6YP21 454 aaKnown RBP17.71■□□□□ 0.43
MUC1-224ENST00000611577 PID1Q7Z2X4 250 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
MUC1-224ENST00000611577 DCP2Q8IU60 420 aaKnown RBP17.71■□□□□ 0.43
MUC1-224ENST00000611577 NDUFAF2Q8N183 169 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 FAM174AQ8TBP5 190 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 CXorf40AQ8TE69 158 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 DPH1Q9BZG8 443 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 SEMA4CQ9C0C4 833 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 SATB2Q9UPW6 733 aa17.71■□□□□ 0.43
MUC1-224ENST00000611577 MYO18BQ8IUG5 2567 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 TSPAN11A1L157 253 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 H3BM21 787 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 KCNN4O15554 427 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 AP1G1O43747 822 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 TIMP2P16035 220 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 RBL1P28749 1068 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 RBMS1P29558 406 aaKnown RBP17.7■□□□□ 0.42
MUC1-224ENST00000611577 CXCR5P32302 372 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 CD86P42081 329 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 TNNT3P45378 269 aaPredicted RBP17.7■□□□□ 0.42
MUC1-224ENST00000611577 RPS21P63220 83 aaKnown RBP17.7■□□□□ 0.42
MUC1-224ENST00000611577 VAC14Q08AM6 782 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 TRAF2Q12933 501 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 LY6DQ14210 128 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 FZD2Q14332 565 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 CDKN3Q16667 212 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 KIAA1161Q6NSJ0 714 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 ZCCHC8Q6NZY4 707 aaKnown RBP17.7■□□□□ 0.42
MUC1-224ENST00000611577 PARGQ86W56 976 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 CNTD1Q8N815 330 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 MAIP1Q8WWC4 291 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 BMFQ96LC9 184 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 C10orf88Q9H8K7 445 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 GPR27Q9NS67 375 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 ITM2BQ9Y287 266 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 HS3ST3A1Q9Y663 406 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
MUC1-224ENST00000611577 POM121BA6NF01 834 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 LZTS3O60299 673 aaPredicted RBP17.69■□□□□ 0.42
MUC1-224ENST00000611577 FGGP02679 453 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 PRKCGP05129 697 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 NME1P15531 152 aaKnown RBP17.69■□□□□ 0.42
MUC1-224ENST00000611577 GNG11P61952 73 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 SGCGQ13326 291 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 KLF1Q13351 362 aaPredicted RBP17.69■□□□□ 0.42
MUC1-224ENST00000611577 FGL2Q14314 439 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 ALG1LQ6GMV1 187 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 ITPRIPL1Q6GPH6 555 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 GUSBP11Q6P575 273 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 EFL1Q7Z2Z2 1120 aaKnown RBP17.69■□□□□ 0.42
MUC1-224ENST00000611577 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 TTC9Q92623 222 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 ECHDC3Q96DC8 303 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 ATXN7L3BQ96GX2 97 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 TEKT5Q96M29 485 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 RBM15Q96T37 977 aaKnown RBP eCLIP17.69■□□□□ 0.42
MUC1-224ENST00000611577 WRAP53Q9BUR4 548 aaKnown RBP17.69■□□□□ 0.42
MUC1-224ENST00000611577 SLC17A9Q9BYT1 436 aa17.69■□□□□ 0.42
MUC1-224ENST00000611577 GLOD4Q9HC38 313 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms