RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 MCM9Q9NXL9 1143 aa4.35□□□□□ -1.71
HDDC2-207ENST00000608532 RALYQ9UKM9 306 aaKnown RBP4.35□□□□□ -1.71
HDDC2-207ENST00000608532 SARDHQ9UL12 918 aa4.35□□□□□ -1.71
HDDC2-207ENST00000608532 PADI1Q9ULC6 663 aa4.35□□□□□ -1.71
HDDC2-207ENST00000608532 CAMK2AQ9UQM7 478 aa4.35□□□□□ -1.71
HDDC2-207ENST00000608532 AAR2Q9Y312 384 aaKnown RBP4.35□□□□□ -1.71
HDDC2-207ENST00000608532 CCDC196A0A1B0GTZ2 297 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 PRR23AA6NEV1 266 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 LRRC53A6NM62 1247 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 GAS8-AS1O95177 125 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 SP1P08047 785 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 RRM1P23921 792 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ABCD1P33897 745 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 HNRNPH2P55795 449 aaKnown RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 PHEXP78562 749 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 GGNBP1Q5YKI7 109 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 TRMT1LQ7Z2T5 733 aaKnown RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 HEATR4Q86WZ0 1026 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 CHERPQ8IWX8 916 aaKnown RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 SMAP1Q8IYB5 467 aaPredicted RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 CCDC13Q8IYE1 715 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ZNF34Q8IZ26 560 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ESX1Q8N693 406 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 LNX1Q8TBB1 728 aaPredicted RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 MAGEC3Q8TD91 643 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ST8SIA4Q92187 359 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 CDCA5Q96FF9 252 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 UHRF2Q96PU4 802 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 PSMD1Q99460 953 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 MTERF1Q99551 399 aaKnown RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 SPRY4Q9C004 299 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 PCDH9Q9HC56 1237 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ABCF3Q9NUQ8 709 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 ERRFI1Q9UJM3 462 aaPredicted RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 AMDHD2Q9Y303 409 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 LOXL2Q9Y4K0 774 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 LRRFIP2Q9Y608 721 aaKnown RBP4.34□□□□□ -1.71
HDDC2-207ENST00000608532 CEPT1Q9Y6K0 416 aa4.34□□□□□ -1.71
HDDC2-207ENST00000608532 UTYO14607 1347 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 USP17L23D6RBM5 183 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 HLA-DOBP13765 273 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 ITGA2P17301 1181 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 ABCD3P28288 659 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 FMO5P49326 533 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 TUBP50607 506 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 RAD23BP54727 409 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 PDE1BQ01064 536 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 CCDC96Q2M329 555 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 DUS1LQ6P1R4 473 aaKnown RBP4.33□□□□□ -1.72
HDDC2-207ENST00000608532 SLC26A9Q7LBE3 791 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 TMPRSS12Q86WS5 348 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 WDR63Q8IWG1 891 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.33□□□□□ -1.72
HDDC2-207ENST00000608532 DMBX1Q8NFW5 382 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 MORC4Q8TE76 937 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 ABTB1Q969K4 478 aaPredicted RBP4.33□□□□□ -1.72
HDDC2-207ENST00000608532 ORAI1Q96D31 301 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 SH3GL2Q99962 352 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 FAM110AQ9BQ89 295 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 IFIH1Q9BYX4 1025 aaKnown RBP4.33□□□□□ -1.72
HDDC2-207ENST00000608532 MMP28Q9H239 520 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 KIF9Q9HAQ2 790 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 MMP25Q9NPA2 562 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 PCDHB16Q9NRJ7 776 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 SLC6A13Q9NSD5 602 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 CYP46A1Q9Y6A2 500 aa4.33□□□□□ -1.72
HDDC2-207ENST00000608532 FGF17O60258 216 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 EGFP01133 1207 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 DDX5P17844 614 aaKnown RBP4.32□□□□□ -1.72
HDDC2-207ENST00000608532 S1PR1P21453 382 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 ISL1P61371 349 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 FGFBP1Q14512 234 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 GSTA3Q16772 222 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 KRT24Q2M2I5 525 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 SIGIRRQ6IA17 410 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 GFRALQ6UXV0 394 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 DSG4Q86SJ6 1040 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 RNF113BQ8IZP6 322 aaKnown RBP4.32□□□□□ -1.72
HDDC2-207ENST00000608532 HMGCLL1Q8TB92 370 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 SAAL1Q96ER3 474 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 HES6Q96HZ4 224 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 PCYT2Q99447 389 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 PAIP1Q9H074 479 aaKnown RBP4.32□□□□□ -1.72
HDDC2-207ENST00000608532 ZFP57Q9NU63 452 aa4.32□□□□□ -1.72
HDDC2-207ENST00000608532 ASPDHA6ND91 283 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 GOLGA6L9A6NEM1 432 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 P2RY10O00398 339 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 VCYO14598 125 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 CAPN9O14815 690 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 TPD52L2O43399 206 aaKnown RBP4.31□□□□□ -1.72
HDDC2-207ENST00000608532 SLC22A3O75751 556 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 FTCDO95954 541 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 F9P00740 461 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 MYOD1P15172 320 aa4.31□□□□□ -1.72
HDDC2-207ENST00000608532 IL7RP16871 459 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms