RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PRELID2Q8N945 189 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 GFM1Q96RP9 751 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 OXCT2Q9BYC2 517 aaPredicted RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SAMD4AQ9UPU9 718 aaKnown RBP9.61□□□□□ -0.87
CSMD1-217ENST00000602723 POM121L1PQ3SYA9 428 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 NIPA1Q7RTP0 329 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TTLL2Q9BWV7 592 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 TRPV5Q9NQA5 729 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 SEMA3GQ9NS98 782 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF224Q9NZL3 707 aa9.61□□□□□ -0.87
CSMD1-217ENST00000602723 A0A087X0B3 334 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SLITRK3O94933 977 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 FTH1P02794 183 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 NOS2P35228 1153 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ATP6V0D1P61421 351 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SCRN3Q0VDG4 424 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PPM1MQ96MI6 270 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 NECTIN3Q9NQS3 549 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SYNPO2Q9UMS6 1093 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 RBM7Q9Y580 266 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ATRXP46100 2492 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 OR14I1A6ND48 311 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SIN3BO75182 1162 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 AP2A2O94973 939 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PIK3R6Q5UE93 754 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 AHSA2Q719I0 299 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 RAD51AP1Q96B01 352 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SOHLH2Q9NX45 425 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PMF1-BGLAPU3KQ54 211 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 KIF1AQ12756 1690 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 NOL9Q5SY16 702 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 TPGS1Q6ZTW0 290 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 VWDEQ8N2E2 1590 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 OR2T12Q8NG77 320 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PHF12Q96QT6 1004 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SPTBP11277 2137 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 A8MUI8 341 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PEX5LQ8IYB4 626 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 KCTD4Q8WVF5 259 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 C12orf4Q9NQ89 552 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SUCOQ9UBS9 1254 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 NCKAP1Q9Y2A7 1128 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PRR5-ARHGAP8B1AHC4 643 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CHKAP35790 457 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ARHGAP8P85298 464 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 LIPEQ05469 1076 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CUZD1Q86UP6 607 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 NPEPPSL1A6NEC2 478 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 H3BNH8 94 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PQBP1O60828 265 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 MSX2P35548 267 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 EIF2S3P41091 472 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 MFSD10Q14728 455 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SUZ12Q15022 739 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 KCNA10Q16322 511 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CWF19L1Q69YN2 538 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 THOC7Q6I9Y2 204 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CXorf40AQ8TE69 158 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 MRPL9Q9BYD2 267 aaKnown RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ABCG8Q9H221 673 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 TMEM165Q9HC07 324 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CDH22Q9UJ99 828 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 TMX2Q9Y320 296 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 HNF4AP41235 474 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 EGFLAMQ63HQ2 1017 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 RTFDC1Q9BY42 306 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 AASDHPPTQ9NRN7 309 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 TRAV19A0A0A6YYK7 116 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 MAGP20916 626 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 EN1Q05925 392 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 OTOP1Q7RTM1 612 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ADGRA1Q86SQ6 560 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 JAZF1Q86VZ6 243 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ATCAYQ86WG3 371 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 SEMA3CQ99985 751 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 RIIAD1A6NNX1 92 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 AQP1P29972 269 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CYP4F8P98187 520 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 WSCD1Q658N2 575 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 GK5Q6ZS86 529 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF433Q8N7K0 673 aaPredicted RBP9.6□□□□□ -0.87
CSMD1-217ENST00000602723 TRAPPC12Q8WVT3 735 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
CSMD1-217ENST00000602723 CAPN8A6NHC0 703 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 SAGP10523 405 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CTSEP14091 401 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 MANFP55145 182 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 THAP5Q7Z6K1 395 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TSEN15Q8WW01 171 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PPCDCQ96CD2 204 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PORCNQ9H237 461 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 BPIFA1Q9NP55 256 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms