RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CMKLR1Q99788 373 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 GSDMCQ9BYG8 508 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 FRMD8Q9BZ67 464 aaPredicted RBP13.15□□□□□ -0.3
RPS28-204ENST00000602140 SEMA6CQ9H3T2 930 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 RDH14Q9HBH5 336 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 GOLGA6AQ9NYA3 693 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 TAAR2Q9P1P5 351 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 SUFUQ9UMX1 484 aa13.15□□□□□ -0.3
RPS28-204ENST00000602140 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 A0A0U1RQS6 177 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 B8ZZF3 427 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 PGLSO95336 258 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 LIPCP11150 499 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 KRT10P13645 584 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 CTPS1P17812 591 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 MMP13P45452 471 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 POLD2P49005 469 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 OR1D5P58170 312 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
RPS28-204ENST00000602140 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 ARMC12Q5T9G4 340 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 MARC1Q5VT66 337 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 RAET1GQ6H3X3 334 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 SLC30A9Q6PML9 568 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 Q6ZVL8 140 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 TSPAN33Q86UF1 283 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 PIM3Q86V86 326 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
RPS28-204ENST00000602140 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 USP7Q93009 1102 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 SCRN2Q96FV2 425 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 PCDH18Q9HCL0 1135 aa13.14□□□□□ -0.31
RPS28-204ENST00000602140 TRNAU1APQ9NX07 287 aaKnown RBP13.14□□□□□ -0.31
RPS28-204ENST00000602140 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
RPS28-204ENST00000602140 PIEZO2Q9H5I5 2752 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 PSMD11O00231 422 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 ECEL1O95672 775 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 CPNE6O95741 557 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 SERPINB6P35237 376 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 ZNF165P49910 485 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 CDH6P55285 790 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 BIRC2Q13490 618 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 C16orf72Q14CZ0 275 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
RPS28-204ENST00000602140 RALGPS1Q5JS13 557 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 USP45Q70EL2 814 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 TEKT4Q8WW24 435 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 PATE1Q8WXA2 126 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 SGF29Q96ES7 293 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 BTBD6Q96KE9 485 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 MCCC1Q96RQ3 725 aaPredicted RBP13.13□□□□□ -0.31
RPS28-204ENST00000602140 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
RPS28-204ENST00000602140 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 CD84Q9UIB8 345 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 ST14Q9Y5Y6 855 aa13.13□□□□□ -0.31
RPS28-204ENST00000602140 SCN8AQ9UQD0 1980 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 UNC13CQ8NB66 2214 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 C9orf172C9J069 976 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 SERPINC1P01008 464 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 PDHA1P08559 390 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 TEAD1P28347 426 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 ADCY8P40145 1251 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 GPR1P46091 355 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 CTBSQ01459 385 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
RPS28-204ENST00000602140 DPTQ07507 201 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 ITKQ08881 620 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 KRT81Q14533 505 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 NR1I3Q14994 352 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 NR1D2Q14995 579 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 MANEAQ5SRI9 462 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 DOK6Q6PKX4 331 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
RPS28-204ENST00000602140 RFLNAQ6ZTI6 216 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 TECPR1Q7Z6L1 1165 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 VASH2Q86V25 355 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 NAGSQ8N159 534 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 RCBTB1Q8NDN9 531 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 PIH1D2Q8WWB5 315 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 SMIM14Q96QK8 99 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 SLC17A4Q9Y2C5 497 aa13.12□□□□□ -0.31
RPS28-204ENST00000602140 PPIL1Q9Y3C6 166 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms