RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ETV3P41162 512 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 PFN3P60673 137 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 MSLNQ13421 630 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 PTK2BQ14289 1009 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 KCNJ11Q14654 390 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 NUMA1Q14980 2115 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 ASCL5Q7RTU5 278 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 JAMLQ86YT9 394 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 BBOF1Q8ND07 529 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 BLOC1S5Q8TDH9 187 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 KLK6Q92876 244 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 AP2M1Q96CW1 435 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 BMFQ96LC9 184 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 RANBP9Q96S59 729 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 KRT12Q99456 494 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 ZSCAN5AQ9BUG6 496 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 FAM83DQ9H4H8 585 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 XAB2Q9HCS7 855 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 GPR27Q9NS67 375 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 ASIC3Q9UHC3 531 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 RIMKLBQ9ULI2 386 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 SPO11Q9Y5K1 396 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 THADAQ6YHU6 1953 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 ATXN2Q99700 1313 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 ARHGAP33O14559 1287 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 RAD51BO15315 384 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 GFRA3O60609 400 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 USP12O75317 370 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 C1SP09871 688 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 KELP23276 732 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 HTR1BP28222 390 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 NPY2RP49146 381 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 SEMG2Q02383 582 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 SPARCL1Q14515 664 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 IRF4Q15306 451 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 TRIP13Q15645 432 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 PNCKQ6P2M8 343 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 LRRC8BQ6P9F7 803 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 TTC30BQ8N4P2 665 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 CEP112Q8N8E3 955 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 PTCD2Q8WV60 388 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 FAM122AQ96E09 287 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 HINFPQ9BQA5 517 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 APOL2Q9BQE5 337 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 IL22Q9GZX6 179 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 GDF3Q9NR23 364 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 BFARQ9NZS9 450 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 IL17CQ9P0M4 197 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 APPL1Q9UKG1 709 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 ANKRD6Q9Y2G4 727 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 COQ6Q9Y2Z9 468 aa16.52■□□□□ 0.24
SHKBP1-219ENST00000599575 ANKRD36A6QL64 1941 aa16.52■□□□□ 0.23
SHKBP1-219ENST00000599575 ZNF292O60281 2723 aa16.52■□□□□ 0.23
SHKBP1-219ENST00000599575 HEATR9A2RTY3 570 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 ESPNB1AK53 854 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 STX7O15400 261 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 YKT6O15498 198 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 PIRTP0C851 137 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 THEGLP0DJG4 465 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 ADRA1DP25100 572 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 PSMA3P25788 255 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 IGFALSP35858 605 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 PLA2G5P39877 138 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 VPS41P49754 854 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 NXPH1P58417 271 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 SPEM2Q0P670 501 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 INPP5AQ14642 412 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 HENMT1Q5T8I9 393 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 DENND2CQ68D51 928 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 ADAMTSL4Q6UY14 1074 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 Q6ZSR6 202 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 TAB3Q8N5C8 712 aaPredicted RBP16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 OR52K1Q8NGK4 314 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 CPT1BQ92523 772 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 EID2BQ96D98 161 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 SMIM14Q96QK8 99 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 PHOX2BQ99453 314 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 ABCG8Q9H221 673 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 WDR26Q9H7D7 661 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 MBNL1Q9NR56 388 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 PIEZO1Q92508 2521 aa16.51■□□□□ 0.23
SHKBP1-219ENST00000599575 SPTY2D1-AS1A0A0U1RR47 76 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 MAGEB16A2A368 324 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CTAGE15A4D2H0 777 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 POM121BA6NF01 834 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CACNB4O00305 520 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 DNALI1O14645 258 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TTI1O43156 1089 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CER1O95813 267 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CTAGE8P0CG41 777 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TGM1P22735 817 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CTSKP43235 329 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 THOP1P52888 689 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 ATXN3P54252 364 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms