RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 KCNK1O00180 336 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 FZD6O60353 706 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 JCHAINP01591 159 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 FUCA1P04066 466 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 KRT1P04264 644 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CYP2A6P11509 494 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CCNB1P14635 433 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CCNCP24863 283 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 RPIAP49247 311 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 USP45Q70EL2 814 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 TAF8Q7Z7C8 310 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 HEATR4Q86WZ0 1026 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CACTIN-AS1Q8N1I8 211 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CBARPQ8N350 705 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 ARL10Q8N8L6 244 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 ATL2Q8NHH9 583 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CCDC74AQ96AQ1 378 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 MCCC1Q96RQ3 725 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 CEP41Q9BYV8 373 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 NCKIPSDQ9NZQ3 722 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 DGKBQ9Y6T7 804 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 COL27A1Q8IZC6 1860 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 TENM4Q6N022 2769 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 PRSS38A1L453 326 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 KIF2AO00139 706 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-203ENST00000598359 PRLP01236 227 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 TUBB4AP04350 444 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 POLD2P49005 469 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 DYNLT1P63172 113 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 GABREP78334 506 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 ZBTB17Q13105 803 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 ARHGEF7Q14155 803 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 LLGL1Q15334 1064 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 RALGPS1Q5JS13 557 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 LRRC66Q68CR7 880 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 GKN2Q86XP6 184 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 CNGA4Q8IV77 575 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 CCDC13Q8IYE1 715 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 FAM46DQ8NEK8 389 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 LPCAT1Q8NF37 534 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 SCG3Q8WXD2 468 aaKnown RBP13.74□□□□□ -0.21
SCAF1-203ENST00000598359 SCAMP4Q969E2 229 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 ATXN7L3BQ96GX2 97 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 TDRD1Q9BXT4 1180 aaKnown RBP13.74□□□□□ -0.21
SCAF1-203ENST00000598359 GOLPH3Q9H4A6 298 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 CARS2Q9HA77 564 aaKnown RBP13.74□□□□□ -0.21
SCAF1-203ENST00000598359 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
SCAF1-203ENST00000598359 A0A087WV48 116 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 A0A0J9YYE9 177 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 USP27XA6NNY8 438 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 B4DGG1 531 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 MTA2O94776 668 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TRBC1P01850 177 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 CEACAM5P06731 702 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 MMP2P08253 660 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 HOXC4P09017 264 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 MYCLP1P12525 358 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 MX2P20592 715 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 EIF2S3P41091 472 aaKnown RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 CD86P42081 329 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 PDX1P52945 283 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 EPHB1P54762 984 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 PTSQ03393 145 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 C19orf57Q0VDD7 668 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 C3orf38Q5JPI3 329 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 ALG1LQ6GMV1 187 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 LVRNQ6Q4G3 990 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 RBM44Q6ZP01 1051 aaKnown RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 RFX6Q8HWS3 928 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 RHOT2Q8IXI1 618 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 SDR16C5Q8N3Y7 309 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 CNTD1Q8N815 330 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 NAT6Q93015 286 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 NAF1Q96HR8 494 aaKnown RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 BAG1Q99933 345 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 TEX101Q9BY14 249 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 ABCG8Q9H221 673 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 PHPT1Q9NRX4 125 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-203ENST00000598359 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
SCAF1-203ENST00000598359 ENTPD2Q9Y5L3 495 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms