RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MMP2P08253 660 aa15.04■□□□□ -0
LIG1-215ENST00000597901 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
LIG1-215ENST00000597901 ZFXP17010 805 aaPredicted RBP15.04■□□□□ -0
LIG1-215ENST00000597901 ZNF30P17039 623 aa15.04■□□□□ -0
LIG1-215ENST00000597901 NOP2P46087 812 aaKnown RBP15.04■□□□□ -0
LIG1-215ENST00000597901 GPR1P46091 355 aa15.04■□□□□ -0
LIG1-215ENST00000597901 POLD2P49005 469 aa15.04■□□□□ -0
LIG1-215ENST00000597901 RPL26P61254 145 aaKnown RBP15.04■□□□□ -0
LIG1-215ENST00000597901 IFI35P80217 286 aaPredicted RBP15.04■□□□□ -0
LIG1-215ENST00000597901 SKOR1P84550 965 aa15.04■□□□□ -0
LIG1-215ENST00000597901 CDK3Q00526 305 aa15.04■□□□□ -0
LIG1-215ENST00000597901 AP1B1Q10567 949 aa15.04■□□□□ -0
LIG1-215ENST00000597901 PDK1Q15118 436 aa15.04■□□□□ -0
LIG1-215ENST00000597901 ODF2Q5BJF6 829 aa15.04■□□□□ -0
LIG1-215ENST00000597901 RAET1GQ6H3X3 334 aa15.04■□□□□ -0
LIG1-215ENST00000597901 MFSD7Q6UXD7 560 aa15.04■□□□□ -0
LIG1-215ENST00000597901 NPNTQ6UXI9 565 aa15.04■□□□□ -0
LIG1-215ENST00000597901 RBM44Q6ZP01 1051 aaKnown RBP15.04■□□□□ -0
LIG1-215ENST00000597901 RFX6Q8HWS3 928 aa15.04■□□□□ -0
LIG1-215ENST00000597901 LSMEM2Q8N112 164 aa15.04■□□□□ -0
LIG1-215ENST00000597901 OR6C4Q8NGE1 309 aa15.04■□□□□ -0
LIG1-215ENST00000597901 WDR48Q8TAF3 677 aa15.04■□□□□ -0
LIG1-215ENST00000597901 GPBAR1Q8TDU6 330 aa15.04■□□□□ -0
LIG1-215ENST00000597901 SCAMP4Q969E2 229 aa15.04■□□□□ -0
LIG1-215ENST00000597901 AP2M1Q96CW1 435 aa15.04■□□□□ -0
LIG1-215ENST00000597901 FRMD8Q9BZ67 464 aaPredicted RBP15.04■□□□□ -0
LIG1-215ENST00000597901 DPEP2Q9H4A9 486 aa15.04■□□□□ -0
LIG1-215ENST00000597901 CARS2Q9HA77 564 aaKnown RBP15.04■□□□□ -0
LIG1-215ENST00000597901 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
LIG1-215ENST00000597901 CD84Q9UIB8 345 aa15.04■□□□□ -0
LIG1-215ENST00000597901 RABGEF1Q9UJ41 708 aa15.04■□□□□ -0
LIG1-215ENST00000597901 RPL26L1Q9UNX3 145 aaKnown RBP15.04■□□□□ -0
LIG1-215ENST00000597901 ENTPD2Q9Y5L3 495 aa15.04■□□□□ -0
LIG1-215ENST00000597901 CFAP47Q6ZTR5 3102 aa15.04■□□□□ -0
LIG1-215ENST00000597901 EIF4E1BA6NMX2 242 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 ANKRD66B4E2M5 251 aa15.03■□□□□ -0
LIG1-215ENST00000597901 NTN3O00634 580 aaPredicted RBP15.03■□□□□ -0
LIG1-215ENST00000597901 ZZEF1O43149 2961 aa15.03■□□□□ -0
LIG1-215ENST00000597901 RRP8O43159 456 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 LCA5LO95447 670 aa15.03■□□□□ -0
LIG1-215ENST00000597901 CLDN7O95471 211 aa15.03■□□□□ -0
LIG1-215ENST00000597901 KRT1P04264 644 aa15.03■□□□□ -0
LIG1-215ENST00000597901 CA4P22748 312 aa15.03■□□□□ -0
LIG1-215ENST00000597901 ITPKBP27987 946 aa15.03■□□□□ -0
LIG1-215ENST00000597901 CD86P42081 329 aa15.03■□□□□ -0
LIG1-215ENST00000597901 ABCG1P45844 678 aa15.03■□□□□ -0
LIG1-215ENST00000597901 STC1P52823 247 aa15.03■□□□□ -0
LIG1-215ENST00000597901 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 GABREP78334 506 aa15.03■□□□□ -0
LIG1-215ENST00000597901 CCL7P80098 99 aa15.03■□□□□ -0
LIG1-215ENST00000597901 ZBTB17Q13105 803 aa15.03■□□□□ -0
LIG1-215ENST00000597901 QPCTQ16769 361 aa15.03■□□□□ -0
LIG1-215ENST00000597901 TBC1D25Q3MII6 688 aa15.03■□□□□ -0
LIG1-215ENST00000597901 SFTPA2Q8IWL1 248 aa15.03■□□□□ -0
LIG1-215ENST00000597901 NRSN1Q8IZ57 195 aa15.03■□□□□ -0
LIG1-215ENST00000597901 LPCAT1Q8NF37 534 aa15.03■□□□□ -0
LIG1-215ENST00000597901 SNIP1Q8TAD8 396 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 PTCD2Q8WV60 388 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 CCDC74AQ96AQ1 378 aa15.03■□□□□ -0
LIG1-215ENST00000597901 ATXN7L3BQ96GX2 97 aa15.03■□□□□ -0
LIG1-215ENST00000597901 AGAP2Q99490 1192 aa15.03■□□□□ -0
LIG1-215ENST00000597901 MLPHQ9BV36 600 aaPredicted RBP15.03■□□□□ -0
LIG1-215ENST00000597901 BRD8Q9H0E9 1235 aa15.03■□□□□ -0
LIG1-215ENST00000597901 POLR1BQ9H9Y6 1135 aa15.03■□□□□ -0
LIG1-215ENST00000597901 SPATS2LQ9NUQ6 558 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 TRNAU1APQ9NX07 287 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 SLC17A4Q9Y2C5 497 aa15.03■□□□□ -0
LIG1-215ENST00000597901 PCDHA13Q9Y5I0 950 aa15.03■□□□□ -0
LIG1-215ENST00000597901 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
LIG1-215ENST00000597901 FAM208BQ5VWN6 2430 aa15.02■□□□□ -0
LIG1-215ENST00000597901 A0A1W2PNU3 283 aaPredicted RBP15.02■□□□□ -0
LIG1-215ENST00000597901 CAPN8A6NHC0 703 aa15.02■□□□□ -0
LIG1-215ENST00000597901 SPOPO43791 374 aa15.02■□□□□ -0
LIG1-215ENST00000597901 NOBOXO60393 691 aa15.02■□□□□ -0
LIG1-215ENST00000597901 SOD1P00441 154 aa15.02■□□□□ -0
LIG1-215ENST00000597901 FGF1P05230 155 aa15.02■□□□□ -0
LIG1-215ENST00000597901 GLB1P16278 677 aa15.02■□□□□ -0
LIG1-215ENST00000597901 GNPDA1P46926 289 aa15.02■□□□□ -0
LIG1-215ENST00000597901 DYNLT1P63172 113 aa15.02■□□□□ -0
LIG1-215ENST00000597901 SPIDRQ14159 915 aa15.02■□□□□ -0
LIG1-215ENST00000597901 TAZQ16635 292 aa15.02■□□□□ -0
LIG1-215ENST00000597901 ADAMTSL4Q6UY14 1074 aa15.02■□□□□ -0
LIG1-215ENST00000597901 B4GALNT4Q76KP1 1039 aa15.02■□□□□ -0
LIG1-215ENST00000597901 ZNF765Q7L2R6 523 aa15.02■□□□□ -0
LIG1-215ENST00000597901 NRROSQ86YC3 692 aa15.02■□□□□ -0
LIG1-215ENST00000597901 RAVER1Q8IY67 606 aaKnown RBP15.02■□□□□ -0
LIG1-215ENST00000597901 CCDC170Q8IYT3 715 aa15.02■□□□□ -0
LIG1-215ENST00000597901 ZNF578Q96N58 590 aaPredicted RBP15.02■□□□□ -0
LIG1-215ENST00000597901 AGAP3Q96P47 875 aa15.02■□□□□ -0
LIG1-215ENST00000597901 OLFM3Q96PB7 478 aa15.02■□□□□ -0
LIG1-215ENST00000597901 LYSMD1Q96S90 227 aa15.02■□□□□ -0
LIG1-215ENST00000597901 ANP32EQ9BTT0 268 aa15.02■□□□□ -0
LIG1-215ENST00000597901 RIOK2Q9BVS4 552 aaKnown RBP15.02■□□□□ -0
LIG1-215ENST00000597901 CEP41Q9BYV8 373 aa15.02■□□□□ -0
LIG1-215ENST00000597901 RBSNQ9H1K0 784 aa15.02■□□□□ -0
LIG1-215ENST00000597901 SUDS3Q9H7L9 328 aaPredicted RBP15.02■□□□□ -0
LIG1-215ENST00000597901 DNPEPQ9ULA0 475 aa15.02■□□□□ -0
LIG1-215ENST00000597901 SUFUQ9UMX1 484 aa15.02■□□□□ -0
LIG1-215ENST00000597901 TFR2Q9UP52 801 aa15.02■□□□□ -0
LIG1-215ENST00000597901 TMEM98Q9Y2Y6 226 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms