RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 UBP1Q9NZI7 540 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 APOBEC3BQ9UH17 382 aaKnown RBP16.71■□□□□ 0.27
SSBP4-204ENST00000597724 FAM153AQ9UHL3 310 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 ANGPTL2Q9UKU9 493 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 AKAP13Q12802 2813 aa16.71■□□□□ 0.27
SSBP4-204ENST00000597724 CHD8Q9HCK8 2581 aa16.71■□□□□ 0.26
SSBP4-204ENST00000597724 C1orf232A0A0U1RR37 186 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 TMEM202A6NGA9 273 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 CACNB4O00305 520 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-204ENST00000597724 FFAR2O15552 330 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 PMPCBO75439 489 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
SSBP4-204ENST00000597724 TEAD1P28347 426 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 BLKP51451 505 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 HK3P52790 923 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 SRP54P61011 504 aaKnown RBP16.7■□□□□ 0.26
SSBP4-204ENST00000597724 DNAJC3Q13217 504 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 ALG11Q2TAA5 492 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 PROX2Q3B8N5 592 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 PRRT3Q5FWE3 981 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 MEI1Q5TIA1 1274 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 DARS2Q6PI48 645 aaKnown RBP16.7■□□□□ 0.26
SSBP4-204ENST00000597724 KDELC1Q6UW63 502 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 ZNF765Q7L2R6 523 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 NRSN1Q8IZ57 195 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 CHCHD4Q8N4Q1 142 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 TTC13Q8NBP0 860 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 LMX1AQ8TE12 382 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 OXNAD1Q96HP4 312 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-204ENST00000597724 LRRC61Q9BV99 259 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 TEX101Q9BY14 249 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 MAGEE1Q9HCI5 957 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 SPASTQ9UBP0 616 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 KLQ9UEF7 1012 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 CD84Q9UIB8 345 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
SSBP4-204ENST00000597724 LOC285095A0A1B0GVY8 99 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 TCRBV7S2A1N4TA0A589 114 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-204ENST00000597724 GCATO75600 419 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 RASGRP1O95267 797 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 NDST3O95803 873 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 EPOP01588 193 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 ALPPL2P10696 532 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 MYCLP1P12525 358 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-204ENST00000597724 CKMT2P17540 419 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 KELP23276 732 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 WNT3AP56704 352 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 KCTD16Q68DU8 428 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 CCDC70Q6NSX1 233 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 HID1Q8IV36 788 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 SCAMP4Q969E2 229 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 AP2M1Q96CW1 435 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 ALS2CR12Q96Q35 445 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 DUSP23Q9BVJ7 150 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 SCNM1Q9BWG6 230 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 CLPBQ9H078 707 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 USP29Q9HBJ7 922 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 PHPT1Q9NRX4 125 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-204ENST00000597724 RSPH14Q9UHP6 348 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 DGKBQ9Y6T7 804 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 FRYQ5TBA9 3013 aa16.69■□□□□ 0.26
SSBP4-204ENST00000597724 LMO7DNF2Z398 122 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 F5H423 210 aaPredicted RBP16.68■□□□□ 0.26
SSBP4-204ENST00000597724 TPP1O14773 563 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 TNFRSF10CO14798 259 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 KCNN4O15554 427 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 HYAL3O43820 417 aaPredicted RBP16.68■□□□□ 0.26
SSBP4-204ENST00000597724 ZNF189O75820 626 aaPredicted RBP16.68■□□□□ 0.26
SSBP4-204ENST00000597724 STK10O94804 968 aaKnown RBP16.68■□□□□ 0.26
SSBP4-204ENST00000597724 SOD1P00441 154 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 PIRTP0C851 137 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 SPINK2P20155 84 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 SPINT3P49223 89 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 MPP3Q13368 585 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 C1orf61Q13536 156 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 RPS6KA1Q15418 735 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 HS1BP3Q53T59 392 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 ANKRD20A2Q5SQ80 823 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 ANKRD20A1Q5TYW2 823 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 ANKRD20A3Q5VUR7 823 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 RAET1GQ6H3X3 334 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 LYSMD3Q7Z3D4 306 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 RD3Q7Z3Z2 195 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 HEATR4Q86WZ0 1026 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 FAM181AQ8N9Y4 354 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 TRIM58Q8NG06 486 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 CCHCR1Q8TD31 782 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 OR1E3Q8WZA6 343 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 EID2BQ96D98 161 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 MRGPRX2Q96LB1 330 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 WDR24Q96S15 920 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 GBA3Q9H227 469 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 ZFYVE1Q9HBF4 777 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 FGF22Q9HCT0 170 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 R3HDM2Q9Y2K5 976 aaKnown RBP16.68■□□□□ 0.26
SSBP4-204ENST00000597724 PCDHGA1Q9Y5H4 931 aa16.68■□□□□ 0.26
SSBP4-204ENST00000597724 LRP4O75096 1905 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms