RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DCBLD1Q8N8Z6 715 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 LPCAT1Q8NF37 534 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 OR6C4Q8NGE1 309 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 IFI44Q8TCB0 444 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 TSACCQ96A04 125 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 GRAMD1AQ96CP6 724 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 PDXPQ96GD0 296 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 DEPDC7Q96QD5 511 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 VAT1Q99536 393 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 NRSN2Q9GZP1 204 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CLPBQ9H078 707 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 SLC25A51Q9H1U9 297 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 FGF22Q9HCT0 170 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 PNMA8BQ9ULN7 279 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 CHKBQ9Y259 395 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 EFR3BQ9Y2G0 817 aa17.72■□□□□ 0.43
SHKBP1-204ENST00000594862 FREM2Q5SZK8 3169 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 hCG_1818297A0A087WSY0 165 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 LY6G6EA0A0G2JKS1 128 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 RGSL1A5PLK6 1076 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 FAM149AA5PLN7 773 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 TRABD2BA6NFA1 517 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 HACD1B0YJ81 288 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 OPA1O60313 960 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 CTNNA1P35221 906 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 STC1P52823 247 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 SKOR1P84550 965 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 C1orf61Q13536 156 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 CCDC70Q6NSX1 233 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 CRTC1Q6UUV9 634 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 ADAMTSL4Q6UY14 1074 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 Q6ZVL8 140 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 EFL1Q7Z2Z2 1120 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 TECPR1Q7Z6L1 1165 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 KIAA1328Q86T90 577 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 TSPAN33Q86UF1 283 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 CNTD1Q8N815 330 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 MAPK15Q8TD08 544 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 CCHCR1Q8TD31 782 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 OR1E3Q8WZA6 343 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 AP2M1Q96CW1 435 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 IMP4Q96G21 291 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 MLPHQ9BV36 600 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 SEPT10Q9P0V9 454 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 U3KQA8 63 aa17.71■□□□□ 0.43
SHKBP1-204ENST00000594862 PRSS38A1L453 326 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GOLGA6CA6NDK9 693 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GOLGA6BA6NDN3 693 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 TMEM202A6NGA9 273 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 ANKRD66B4E2M5 251 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 PJA2O43164 708 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 MT-CO3P00414 261 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 MMP2P08253 660 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GOLGA6DP0CG33 693 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 TNNT3P45378 269 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GPR1P46091 355 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 CDK3Q00526 305 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 TARDBPQ13148 414 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 CDKN3Q16667 212 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 TEX44Q53QW1 395 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 KAZNQ674X7 775 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 NPNTQ6UXI9 565 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 BBS12Q6ZW61 710 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 SLC35F3Q8IY50 421 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 SYCE1Q8N0S2 351 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 KIAA1524Q8TCG1 905 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 AGAP3Q96P47 875 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 CDH19Q9H159 772 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 RAD18Q9NS91 495 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 GOLGA6AQ9NYA3 693 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 PKD2L2Q9NZM6 624 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 FASNP49327 2511 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 NBEAQ8NFP9 2946 aa17.7■□□□□ 0.42
SHKBP1-204ENST00000594862 C1orf232A0A0U1RR37 186 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 CPED1A4D0V7 1026 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 TCEA3O75764 348 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 PRLP01236 227 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 CAPNS1P04632 268 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 PTPN7P35236 360 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 PTSQ03393 145 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 KIF5AQ12840 1032 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 ILF3Q12906 894 aaKnown RBP eCLIP17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 XRCC4Q13426 336 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 CCDC181Q5TID7 509 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 CDCP2Q5VXM1 449 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 GUSBP11Q6P575 273 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 LRRN4Q8WUT4 740 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 TEKT5Q96M29 485 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 GSDMCQ9BYG8 508 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 FRMD8Q9BZ67 464 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 ABCG8Q9H221 673 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 GLOD4Q9HC38 313 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 CYP4F12Q9HCS2 524 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 TRNAU1APQ9NX07 287 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 MOSPD1Q9UJG1 213 aa17.69■□□□□ 0.42
SHKBP1-204ENST00000594862 GPR34Q9UPC5 381 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms