RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TMEM145Q8NBT3 493 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 TADA1Q96BN2 335 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 SCRN2Q96FV2 425 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 SEC16BQ96JE7 1060 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 USP29Q9HBJ7 922 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 FZD3Q9NPG1 666 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 FSCN3Q9NQT6 498 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 RXFP3Q9NSD7 469 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 B4GALT6Q9UBX8 382 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 PLXNA2O75051 1894 aa19.66■□□□□ 0.74
LSM4-203ENST00000593829 A0A1B0GVT2 93 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 CYP2A6P11509 494 aaPredicted RBP19.65■□□□□ 0.74
LSM4-203ENST00000593829 RALGDSQ12967 914 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 CACNA2D3Q8IZS8 1091 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 SPATA22Q8NHS9 363 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 LENG8Q96PV6 779 aaPredicted RBP19.65■□□□□ 0.74
LSM4-203ENST00000593829 FCRL5Q96RD9 977 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 MCCC1Q96RQ3 725 aaPredicted RBP19.65■□□□□ 0.74
LSM4-203ENST00000593829 MYOCQ99972 504 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 EDEM2Q9BV94 578 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 C1QTNF7Q9BXJ2 289 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 ADGRE3Q9BY15 652 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 ZDHHC5Q9C0B5 715 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 CXorf56Q9H5V9 222 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 DNPEPQ9ULA0 475 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 TRPM6Q9BX84 2022 aa19.65■□□□□ 0.74
LSM4-203ENST00000593829 A0A1W2PR77 199 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 A8MX80 341 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 VILLO15195 856 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 MT-CYBP00156 380 aaPredicted RBP19.64■□□□□ 0.74
LSM4-203ENST00000593829 FGGP02679 453 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ELFN1P0C7U0 828 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 C6P13671 934 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ATXN3P54252 364 aaPredicted RBP19.64■□□□□ 0.74
LSM4-203ENST00000593829 C21orf59P57076 290 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ARHGAP8P85298 464 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 IFFO1Q0D2I5 559 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 GRIK2Q13002 908 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ANKRD20A2Q5SQ80 823 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ANKRD20A1Q5TYW2 823 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ANKRD20A3Q5VUR7 823 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 LAYNQ6UX15 382 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 MFSD2AQ8NA29 543 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 LPCAT1Q8NF37 534 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 MAIP1Q8WWC4 291 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ATG4AQ8WYN0 398 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 DDX47Q9H0S4 455 aaKnown RBP19.64■□□□□ 0.74
LSM4-203ENST00000593829 RAB17Q9H0T7 212 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 ANKRD6Q9Y2G4 727 aa19.64■□□□□ 0.74
LSM4-203ENST00000593829 A0A0J9YYE9 177 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 LZTS3O60299 673 aaPredicted RBP19.64■□□□□ 0.73
LSM4-203ENST00000593829 GDF9O60383 454 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 TRBC1P01850 177 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 WNT1P04628 370 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 CTPS1P17812 591 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 VIPR1P32241 457 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 OVGP1Q12889 678 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 LIPIQ6XZB0 460 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 IQCHQ86VS3 1027 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 OR2W6PQ8NHA6 318 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 UBLCP1Q8WVY7 318 aaPredicted RBP19.64■□□□□ 0.73
LSM4-203ENST00000593829 SGSM3Q96HU1 749 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 SPATA13Q96N96 652 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 GTPBP2Q9BX10 602 aaKnown RBP19.64■□□□□ 0.73
LSM4-203ENST00000593829 UBP1Q9NZI7 540 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 CA5BQ9Y2D0 317 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 UTP11Q9Y3A2 253 aaKnown RBP19.64■□□□□ 0.73
LSM4-203ENST00000593829 HS3ST3A1Q9Y663 406 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 LAMA1P25391 3075 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 PI4KAP42356 2102 aa19.64■□□□□ 0.73
LSM4-203ENST00000593829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 LIASO43766 372 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 PMPCBO75439 489 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 DNAJC8O75937 253 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 NUDT17P0C025 328 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 CDK18Q07002 472 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 PCSK7Q16549 785 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 KIF19Q2TAC6 998 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 GKAP1Q5VSY0 366 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 IL27RAQ6UWB1 636 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 HOOK3Q86VS8 718 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 FAM71DQ8N9W8 422 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 DENND6BQ8NEG7 585 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 C1orf54Q8WWF1 131 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 IFT43Q96FT9 208 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 KLF6Q99612 283 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 TMEM121Q9BTD3 319 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 AP1M1Q9BXS5 423 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 GBA3Q9H227 469 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 NOVA2Q9UNW9 492 aaKnown RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 COQ6Q9Y2Z9 468 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 FAM187AA6NFU0 413 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 NPIPB15A6NHN6 443 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 RAD51BO15315 384 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 OPHN1O60890 802 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 ALPIP09923 528 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 DRD4P21917 467 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 HNF1BP35680 557 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 DRG2P55039 364 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms